RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.16
SRRM4-201ENST00000267260 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.17
SRRM4-201ENST00000267260 GPRASP1Q5JY77 1395 aa14.02□□□□□ -0.17
SRRM4-201ENST00000267260 KIF20AO95235 890 aa14.02□□□□□ -0.17
SRRM4-201ENST00000267260 PLEKHO1Q53GL0 409 aaPredicted RBP14.02□□□□□ -0.17
SRRM4-201ENST00000267260 PUS7Q96PZ0 661 aaKnown RBP14.02□□□□□ -0.17
SRRM4-201ENST00000267260 HOMER2Q9NSB8 354 aa14.02□□□□□ -0.17
SRRM4-201ENST00000267260 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.17
SRRM4-201ENST00000267260 PDRG1Q9NUG6 133 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 CCDC196A0A1B0GTZ2 297 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 URI1O94763 535 aaPredicted RBP14.01□□□□□ -0.17
SRRM4-201ENST00000267260 CETN1Q12798 172 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 STK3Q13188 491 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 IFI16Q16666 785 aaKnown RBP14.01□□□□□ -0.17
SRRM4-201ENST00000267260 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
SRRM4-201ENST00000267260 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
SRRM4-201ENST00000267260 MPNDQ8N594 471 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 TMCO5BA8MYB1 307 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 TDO2P48775 406 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 EHBP1Q8NDI1 1231 aa14.01□□□□□ -0.17
SRRM4-201ENST00000267260 PYM1Q9BRP8 204 aaKnown RBP14□□□□□ -0.17
SRRM4-201ENST00000267260 LRRC45Q96CN5 670 aa14□□□□□ -0.17
SRRM4-201ENST00000267260 SSBP05455 408 aaKnown RBP eCLIP14□□□□□ -0.17
SRRM4-201ENST00000267260 MCM5P33992 734 aa14□□□□□ -0.17
SRRM4-201ENST00000267260 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
SRRM4-201ENST00000267260 MPHOSPH8Q99549 860 aa14□□□□□ -0.17
SRRM4-201ENST00000267260 CTNNA2P26232 953 aa14□□□□□ -0.17
SRRM4-201ENST00000267260 HSF2BPO75031 334 aa14□□□□□ -0.17
SRRM4-201ENST00000267260 PABPN1LA6NDY0 278 aaKnown RBP13.99□□□□□ -0.17
SRRM4-201ENST00000267260 PAXBP1Q9Y5B6 917 aa13.99□□□□□ -0.17
SRRM4-201ENST00000267260 HLTFQ14527 1009 aaKnown RBP eCLIP13.99□□□□□ -0.17
SRRM4-201ENST00000267260 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
SRRM4-201ENST00000267260 ZFYP08048 801 aaPredicted RBP13.99□□□□□ -0.17
SRRM4-201ENST00000267260 PLVAPQ9BX97 442 aa13.99□□□□□ -0.17
SRRM4-201ENST00000267260 SYCE3A1L190 88 aa13.99□□□□□ -0.17
SRRM4-201ENST00000267260 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
SRRM4-201ENST00000267260 KRT222Q8N1A0 295 aa13.99□□□□□ -0.17
SRRM4-201ENST00000267260 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 CTNNBL1Q8WYA6 563 aaPredicted RBP13.98□□□□□ -0.17
SRRM4-201ENST00000267260 NUP88Q99567 741 aaPredicted RBP13.98□□□□□ -0.17
SRRM4-201ENST00000267260 MCM4P33991 863 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 CAVIN2O95810 425 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 TUBB4BP68371 445 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 MAATS1Q7Z4T9 603 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 YEATS4O95619 227 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 PPP1R14CQ8TAE6 165 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 CLIP2Q9UDT6 1046 aa13.98□□□□□ -0.17
SRRM4-201ENST00000267260 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
SRRM4-201ENST00000267260 RSRC1Q96IZ7 334 aaKnown RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 TTC31Q49AM3 519 aaPredicted RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 CHD1LQ86WJ1 897 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 NOB1Q9ULX3 412 aaKnown RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 ARHGAP5Q13017 1502 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 ZMYND15Q9H091 742 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 TTC12Q9H892 705 aaPredicted RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 TMEM266Q2M3C6 531 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 PRIMPOLQ96LW4 560 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 SSX2IPQ9Y2D8 614 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 TWISTNBQ3B726 338 aaPredicted RBP13.97□□□□□ -0.17
SRRM4-201ENST00000267260 COMMD10Q9Y6G5 202 aa13.97□□□□□ -0.17
SRRM4-201ENST00000267260 CCDC155Q8N6L0 562 aa13.96□□□□□ -0.17
SRRM4-201ENST00000267260 MIPOL1Q8TD10 442 aa13.96□□□□□ -0.17
SRRM4-201ENST00000267260 RAB3IL1Q8TBN0 382 aa13.96□□□□□ -0.17
SRRM4-201ENST00000267260 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
SRRM4-201ENST00000267260 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
SRRM4-201ENST00000267260 TTC21AQ8NDW8 1320 aa13.96□□□□□ -0.17
SRRM4-201ENST00000267260 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
SRRM4-201ENST00000267260 A0A1W2PRG0 241 aa13.96□□□□□ -0.18
SRRM4-201ENST00000267260 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.18
SRRM4-201ENST00000267260 KIF5BP33176 963 aa13.96□□□□□ -0.18
SRRM4-201ENST00000267260 KLHL34Q8N239 644 aa13.96□□□□□ -0.18
SRRM4-201ENST00000267260 CKAP4Q07065 602 aaKnown RBP13.96□□□□□ -0.18
SRRM4-201ENST00000267260 SH2B1Q9NRF2 756 aaPredicted RBP13.95□□□□□ -0.18
SRRM4-201ENST00000267260 MXRA7P84157 204 aa13.95□□□□□ -0.18
SRRM4-201ENST00000267260 FKBP4Q02790 459 aaKnown RBP eCLIP13.95□□□□□ -0.18
SRRM4-201ENST00000267260 WDR63Q8IWG1 891 aa13.95□□□□□ -0.18
SRRM4-201ENST00000267260 JAKMIP1Q96N16 626 aaKnown RBP13.95□□□□□ -0.18
SRRM4-201ENST00000267260 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
SRRM4-201ENST00000267260 A0A087WZG4 1122 aa13.95□□□□□ -0.18
SRRM4-201ENST00000267260 KIF4AO95239 1232 aa13.95□□□□□ -0.18
SRRM4-201ENST00000267260 C16orf45Q96MC5 204 aaPredicted RBP13.95□□□□□ -0.18
SRRM4-201ENST00000267260 SERPINA10Q9UK55 444 aa13.95□□□□□ -0.18
SRRM4-201ENST00000267260 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
SRRM4-201ENST00000267260 AMPD3Q01432 767 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 PIBF1Q8WXW3 757 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 NLRP2Q9NX02 1062 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 SARNPP82979 210 aaKnown RBP13.94□□□□□ -0.18
SRRM4-201ENST00000267260 SMC6Q96SB8 1091 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 BACH2Q9BYV9 841 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 RBM5P52756 815 aaKnown RBP eCLIP13.94□□□□□ -0.18
SRRM4-201ENST00000267260 KANK3Q6NY19 840 aa13.94□□□□□ -0.18
SRRM4-201ENST00000267260 PAIP2Q9BPZ3 127 aaKnown RBP13.94□□□□□ -0.18
SRRM4-201ENST00000267260 HYPKQ9NX55 129 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms