RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 UBR2Q8IWV8 1755 aa18.75■□□□□ 0.59
SSBP1-201ENST00000265304 IL16Q14005 1332 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 KDM3BQ7LBC6 1761 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 ZNF853P0CG23 659 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 MCM10Q7L590 875 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 WDR63Q8IWG1 891 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 NFATC2IPQ8NCF5 419 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 LY75O60449 1722 aa18.74■□□□□ 0.59
SSBP1-201ENST00000265304 CABP4P57796 275 aa18.73■□□□□ 0.59
SSBP1-201ENST00000265304 DCTN1Q14203 1278 aa18.73■□□□□ 0.59
SSBP1-201ENST00000265304 TAF7Q15545 349 aaPredicted RBP18.73■□□□□ 0.59
SSBP1-201ENST00000265304 PTF1AQ7RTS3 328 aa18.73■□□□□ 0.59
SSBP1-201ENST00000265304 PLSCR1O15162 318 aa18.72■□□□□ 0.59
SSBP1-201ENST00000265304 CALD1Q05682 793 aaKnown RBP18.72■□□□□ 0.59
SSBP1-201ENST00000265304 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
SSBP1-201ENST00000265304 TMOD3Q9NYL9 352 aa18.72■□□□□ 0.59
SSBP1-201ENST00000265304 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
SSBP1-201ENST00000265304 CHL1O00533 1208 aa18.71■□□□□ 0.59
SSBP1-201ENST00000265304 TEFQ10587 303 aa18.71■□□□□ 0.59
SSBP1-201ENST00000265304 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
SSBP1-201ENST00000265304 TRIM37O94972 964 aa18.7■□□□□ 0.58
SSBP1-201ENST00000265304 CFAP44Q96MT7 982 aa18.7■□□□□ 0.58
SSBP1-201ENST00000265304 THUMPD2Q9BTF0 503 aaKnown RBP18.69■□□□□ 0.58
SSBP1-201ENST00000265304 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
SSBP1-201ENST00000265304 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
SSBP1-201ENST00000265304 UPF1Q92900 1129 aaKnown RBP eCLIP18.68■□□□□ 0.58
SSBP1-201ENST00000265304 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
SSBP1-201ENST00000265304 IFT57Q9NWB7 429 aa18.68■□□□□ 0.58
SSBP1-201ENST00000265304 ZNF790Q6PG37 636 aa18.67■□□□□ 0.58
SSBP1-201ENST00000265304 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
SSBP1-201ENST00000265304 GNAI1P63096 354 aa18.66■□□□□ 0.58
SSBP1-201ENST00000265304 TRMT2AQ8IZ69 625 aaKnown RBP18.66■□□□□ 0.58
SSBP1-201ENST00000265304 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
SSBP1-201ENST00000265304 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
SSBP1-201ENST00000265304 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
SSBP1-201ENST00000265304 BTBD11A6QL63 1104 aa18.65■□□□□ 0.58
SSBP1-201ENST00000265304 SYTL4Q96C24 671 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-201ENST00000265304 VSIG10Q8N0Z9 540 aa18.64■□□□□ 0.57
SSBP1-201ENST00000265304 CAMKK2Q96RR4 588 aa18.64■□□□□ 0.57
SSBP1-201ENST00000265304 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
SSBP1-201ENST00000265304 PROM2Q8N271 834 aa18.63■□□□□ 0.57
SSBP1-201ENST00000265304 PALLDQ8WX93 1383 aa18.63■□□□□ 0.57
SSBP1-201ENST00000265304 APBA3O96018 575 aa18.62■□□□□ 0.57
SSBP1-201ENST00000265304 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
SSBP1-201ENST00000265304 RREB1Q92766 1687 aa18.62■□□□□ 0.57
SSBP1-201ENST00000265304 HMGB2P26583 209 aaKnown RBP18.61■□□□□ 0.57
SSBP1-201ENST00000265304 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
SSBP1-201ENST00000265304 SLFN5Q08AF3 891 aa18.61■□□□□ 0.57
SSBP1-201ENST00000265304 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
SSBP1-201ENST00000265304 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
SSBP1-201ENST00000265304 SLC4A9Q96Q91 983 aa18.61■□□□□ 0.57
SSBP1-201ENST00000265304 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
SSBP1-201ENST00000265304 CACNA1FO60840 1977 aa18.61■□□□□ 0.57
SSBP1-201ENST00000265304 COL5A3P25940 1745 aaPredicted RBP18.6■□□□□ 0.57
SSBP1-201ENST00000265304 KCNQ3O43525 872 aa18.6■□□□□ 0.57
SSBP1-201ENST00000265304 ZNF496Q96IT1 587 aaPredicted RBP18.6■□□□□ 0.57
SSBP1-201ENST00000265304 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
SSBP1-201ENST00000265304 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
SSBP1-201ENST00000265304 SALL2Q9Y467 1007 aaPredicted RBP18.6■□□□□ 0.57
SSBP1-201ENST00000265304 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
SSBP1-201ENST00000265304 TJP1Q07157 1748 aa18.6■□□□□ 0.57
SSBP1-201ENST00000265304 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
SSBP1-201ENST00000265304 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
SSBP1-201ENST00000265304 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
SSBP1-201ENST00000265304 E9PSI1 815 aa18.59■□□□□ 0.57
SSBP1-201ENST00000265304 SIK1P57059 783 aa18.59■□□□□ 0.57
SSBP1-201ENST00000265304 TSPYL4Q9UJ04 414 aa18.59■□□□□ 0.57
SSBP1-201ENST00000265304 C5P01031 1676 aa18.58■□□□□ 0.57
SSBP1-201ENST00000265304 BAG6P46379 1132 aa18.58■□□□□ 0.56
SSBP1-201ENST00000265304 FMNL2Q96PY5 1086 aa18.58■□□□□ 0.56
SSBP1-201ENST00000265304 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
SSBP1-201ENST00000265304 HOXB7P09629 217 aa18.57■□□□□ 0.56
SSBP1-201ENST00000265304 SF3B2Q13435 895 aaKnown RBP18.57■□□□□ 0.56
SSBP1-201ENST00000265304 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
SSBP1-201ENST00000265304 TTC5Q8N0Z6 440 aa18.57■□□□□ 0.56
SSBP1-201ENST00000265304 TEX13AQ9BXU3 409 aaPredicted RBP18.57■□□□□ 0.56
SSBP1-201ENST00000265304 MYH16Q9H6N6 1097 aa18.57■□□□□ 0.56
SSBP1-201ENST00000265304 LAMB4A4D0S4 1761 aa18.56■□□□□ 0.56
SSBP1-201ENST00000265304 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
SSBP1-201ENST00000265304 FANCIQ9NVI1 1328 aa18.55■□□□□ 0.56
SSBP1-201ENST00000265304 NUP188Q5SRE5 1749 aa18.55■□□□□ 0.56
SSBP1-201ENST00000265304 SNRPA1P09661 255 aaKnown RBP18.55■□□□□ 0.56
SSBP1-201ENST00000265304 DUSP27Q5VZP5 1158 aa18.55■□□□□ 0.56
SSBP1-201ENST00000265304 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
SSBP1-201ENST00000265304 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
SSBP1-201ENST00000265304 ITPK1Q13572 414 aa18.54■□□□□ 0.56
SSBP1-201ENST00000265304 RC3H1Q5TC82 1133 aaKnown RBP18.54■□□□□ 0.56
SSBP1-201ENST00000265304 CDCA7LQ96GN5 454 aa18.54■□□□□ 0.56
SSBP1-201ENST00000265304 SOCS7O14512 581 aa18.53■□□□□ 0.56
SSBP1-201ENST00000265304 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
SSBP1-201ENST00000265304 CCNL1Q9UK58 526 aaPredicted RBP18.53■□□□□ 0.56
SSBP1-201ENST00000265304 CYP19A1P11511 503 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-201ENST00000265304 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
SSBP1-201ENST00000265304 EZH2Q15910 746 aaKnown RBP18.52■□□□□ 0.56
SSBP1-201ENST00000265304 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
SSBP1-201ENST00000265304 LAS1LQ9Y4W2 734 aaKnown RBP18.52■□□□□ 0.56
SSBP1-201ENST00000265304 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.55
SSBP1-201ENST00000265304 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
SSBP1-201ENST00000265304 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms