RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PI4KAP1Q8N8J0 262 aa11.59□□□□□ -0.55
SSR3-201ENST00000265044 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
SSR3-201ENST00000265044 EXOC5O00471 708 aa11.59□□□□□ -0.55
SSR3-201ENST00000265044 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
SSR3-201ENST00000265044 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
SSR3-201ENST00000265044 PIP4K2AP48426 406 aaPredicted RBP11.58□□□□□ -0.56
SSR3-201ENST00000265044 RTL5Q5HYW3 569 aaPredicted RBP11.58□□□□□ -0.56
SSR3-201ENST00000265044 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
SSR3-201ENST00000265044 MEIS3Q99687 375 aa11.58□□□□□ -0.56
SSR3-201ENST00000265044 PHAXQ9H814 394 aaKnown RBP11.58□□□□□ -0.56
SSR3-201ENST00000265044 TMOD3Q9NYL9 352 aa11.58□□□□□ -0.56
SSR3-201ENST00000265044 IQSEC2Q5JU85 1478 aa11.58□□□□□ -0.56
SSR3-201ENST00000265044 ADGRB2O60241 1585 aa11.58□□□□□ -0.56
SSR3-201ENST00000265044 DCAF5Q96JK2 942 aa11.58□□□□□ -0.56
SSR3-201ENST00000265044 MST1RQ04912 1400 aa11.57□□□□□ -0.56
SSR3-201ENST00000265044 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
SSR3-201ENST00000265044 FMNL2Q96PY5 1086 aa11.57□□□□□ -0.56
SSR3-201ENST00000265044 ZBTB40Q9NUA8 1239 aa11.57□□□□□ -0.56
SSR3-201ENST00000265044 RGPD8O14715 1765 aaPredicted RBP11.57□□□□□ -0.56
SSR3-201ENST00000265044 TNS3Q68CZ2 1445 aa11.57□□□□□ -0.56
SSR3-201ENST00000265044 BACH2Q9BYV9 841 aa11.57□□□□□ -0.56
SSR3-201ENST00000265044 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
SSR3-201ENST00000265044 DNAAF4Q8WXU2 420 aa11.56□□□□□ -0.56
SSR3-201ENST00000265044 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
SSR3-201ENST00000265044 EIF4A1P60842 406 aaKnown RBP11.56□□□□□ -0.56
SSR3-201ENST00000265044 ZNF790Q6PG37 636 aa11.56□□□□□ -0.56
SSR3-201ENST00000265044 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
SSR3-201ENST00000265044 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
SSR3-201ENST00000265044 PHKG2P15735 406 aa11.56□□□□□ -0.56
SSR3-201ENST00000265044 CHD1LQ86WJ1 897 aa11.56□□□□□ -0.56
SSR3-201ENST00000265044 C8orf37Q96NL8 207 aa11.56□□□□□ -0.56
SSR3-201ENST00000265044 KDRP35968 1356 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 NPHP1O15259 732 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
SSR3-201ENST00000265044 BECN1Q14457 450 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 NBR1Q14596 966 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 EXOC6BQ9Y2D4 811 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 SLC52A2Q9HAB3 445 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 BABAM1Q9NWV8 329 aa11.55□□□□□ -0.56
SSR3-201ENST00000265044 HYPKQ9NX55 129 aa11.54□□□□□ -0.56
SSR3-201ENST00000265044 MAP3K2Q9Y2U5 619 aa11.54□□□□□ -0.56
SSR3-201ENST00000265044 NOP58Q9Y2X3 529 aaKnown RBP11.54□□□□□ -0.56
SSR3-201ENST00000265044 XRN1Q8IZH2 1706 aaKnown RBP11.54□□□□□ -0.56
SSR3-201ENST00000265044 USP19O94966 1318 aa11.54□□□□□ -0.56
SSR3-201ENST00000265044 LRRFIP2Q9Y608 721 aaKnown RBP11.54□□□□□ -0.56
SSR3-201ENST00000265044 WDR17Q8IZU2 1322 aa11.54□□□□□ -0.56
SSR3-201ENST00000265044 CHD2O14647 1828 aaKnown RBP11.54□□□□□ -0.56
SSR3-201ENST00000265044 SRGAP3O43295 1099 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 HDAC1Q13547 482 aaPredicted RBP11.53□□□□□ -0.56
SSR3-201ENST00000265044 ZNF496Q96IT1 587 aaPredicted RBP11.53□□□□□ -0.56
SSR3-201ENST00000265044 IPO9Q96P70 1041 aaKnown RBP11.53□□□□□ -0.56
SSR3-201ENST00000265044 KDM2BQ8NHM5 1336 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 NCOA3Q9Y6Q9 1424 aa11.53□□□□□ -0.56
SSR3-201ENST00000265044 COPS6Q7L5N1 327 aa11.52□□□□□ -0.56
SSR3-201ENST00000265044 MON2Q7Z3U7 1717 aa11.52□□□□□ -0.56
SSR3-201ENST00000265044 SMARCA5O60264 1052 aaPredicted RBP11.52□□□□□ -0.57
SSR3-201ENST00000265044 DCCP43146 1447 aa11.52□□□□□ -0.57
SSR3-201ENST00000265044 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
SSR3-201ENST00000265044 MYD88Q99836 296 aa11.52□□□□□ -0.57
SSR3-201ENST00000265044 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 DDB1Q16531 1140 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 INTS3Q68E01 1043 aaKnown RBP11.51□□□□□ -0.57
SSR3-201ENST00000265044 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 ACSBG1Q96GR2 724 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 ANKRD26Q9UPS8 1709 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 PRAMEF22A3QJZ6 481 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
SSR3-201ENST00000265044 CARD10Q9BWT7 1032 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
SSR3-201ENST00000265044 CYP27B1O15528 508 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 G3BP1Q13283 466 aaKnown RBP eCLIP11.51□□□□□ -0.57
SSR3-201ENST00000265044 SPRYD3Q8NCJ5 442 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 IL1RAPL2Q9NP60 686 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.51□□□□□ -0.57
SSR3-201ENST00000265044 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
SSR3-201ENST00000265044 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
SSR3-201ENST00000265044 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
SSR3-201ENST00000265044 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 STARD3NLO95772 234 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 SIL1Q9H173 461 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 NALCNQ8IZF0 1738 aa11.5□□□□□ -0.57
SSR3-201ENST00000265044 ABCC4O15439 1325 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 AKAP12Q02952 1782 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 HOXB7P09629 217 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
SSR3-201ENST00000265044 CWF19L2Q2TBE0 894 aaKnown RBP11.49□□□□□ -0.57
SSR3-201ENST00000265044 USP16Q9Y5T5 823 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 KSR2Q6VAB6 950 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 ANKRD44Q8N8A2 993 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 LRRCC1Q9C099 1032 aa11.49□□□□□ -0.57
SSR3-201ENST00000265044 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
SSR3-201ENST00000265044 SOS1Q07889 1333 aaPredicted RBP11.49□□□□□ -0.57
SSR3-201ENST00000265044 KIF6Q6ZMV9 814 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms