RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 ERLIN1O75477 346 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 ATP2B1P20020 1258 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 MEIS3Q99687 375 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 SMTNL1A8MU46 457 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 PDE1AP54750 535 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 OTUD7AQ8TE49 926 aaPredicted RBP17.74■□□□□ 0.43
CASC3-201ENST00000264645 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 PCMTD1Q96MG8 357 aaPredicted RBP17.74■□□□□ 0.43
CASC3-201ENST00000264645 TRIM34Q9BYJ4 488 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 NEMFO60524 1076 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
CASC3-201ENST00000264645 HDGFL1Q5TGJ6 251 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 MBIPQ9NS73 344 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 ANO10Q9NW15 660 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
CASC3-201ENST00000264645 FBLN1P23142 703 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 NECAB1Q8N987 351 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 SH2B1Q9NRF2 756 aaPredicted RBP17.73■□□□□ 0.43
CASC3-201ENST00000264645 CFAP43Q8NDM7 1665 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 POLR3AO14802 1390 aaPredicted RBP17.73■□□□□ 0.43
CASC3-201ENST00000264645 RDXP35241 583 aaKnown RBP17.73■□□□□ 0.43
CASC3-201ENST00000264645 STK11IPQ8N1F8 1099 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 ZNF397Q8NF99 534 aaPredicted RBP17.73■□□□□ 0.43
CASC3-201ENST00000264645 GPT2Q8TD30 523 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 DNAJC25Q9H1X3 360 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 CDK19Q9BWU1 502 aa17.73■□□□□ 0.43
CASC3-201ENST00000264645 CAGE1Q8TC20 777 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 GTF3C6Q969F1 213 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 DTNBO60941 627 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 GPATCH11Q8N954 259 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 PZPP20742 1482 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 TMC6Q7Z403 805 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 SIL1Q9H173 461 aa17.72■□□□□ 0.43
CASC3-201ENST00000264645 IL16Q14005 1332 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 HIP1O00291 1037 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 SLU7O95391 586 aaKnown RBP17.71■□□□□ 0.43
CASC3-201ENST00000264645 TYRO3Q06418 890 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 TRDNQ13061 729 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 RALYLQ86SE5 291 aaKnown RBP17.71■□□□□ 0.43
CASC3-201ENST00000264645 ANKRD44Q8N8A2 993 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 DCTPP1Q9H773 170 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 F13A1P00488 732 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 ZSWIM4Q9H7M6 989 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
CASC3-201ENST00000264645 FAM193AP78312 1265 aa17.71■□□□□ 0.43
CASC3-201ENST00000264645 DHX8Q14562 1220 aaKnown RBP17.71■□□□□ 0.43
CASC3-201ENST00000264645 CCDC171Q6TFL3 1326 aa17.71■□□□□ 0.42
CASC3-201ENST00000264645 TCOF1Q13428 1488 aaKnown RBP17.7■□□□□ 0.42
CASC3-201ENST00000264645 AACSQ86V21 672 aa17.7■□□□□ 0.42
CASC3-201ENST00000264645 BIN1O00499 593 aa17.7■□□□□ 0.42
CASC3-201ENST00000264645 GUCY1B3Q02153 619 aa17.7■□□□□ 0.42
CASC3-201ENST00000264645 TCEANC2Q96MN5 208 aa17.7■□□□□ 0.42
CASC3-201ENST00000264645 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
CASC3-201ENST00000264645 COL17A1Q9UMD9 1497 aaPredicted RBP17.7■□□□□ 0.42
CASC3-201ENST00000264645 INSRP06213 1382 aa17.69■□□□□ 0.42
CASC3-201ENST00000264645 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
CASC3-201ENST00000264645 PDIA4P13667 645 aaKnown RBP17.69■□□□□ 0.42
CASC3-201ENST00000264645 TRMT2AQ8IZ69 625 aaKnown RBP17.69■□□□□ 0.42
CASC3-201ENST00000264645 MRPL50Q8N5N7 158 aaKnown RBP17.69■□□□□ 0.42
CASC3-201ENST00000264645 DNAI1Q9UI46 699 aa17.69■□□□□ 0.42
CASC3-201ENST00000264645 LRRFIP2Q9Y608 721 aaKnown RBP17.69■□□□□ 0.42
CASC3-201ENST00000264645 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
CASC3-201ENST00000264645 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
CASC3-201ENST00000264645 AKAP17AQ02040 695 aaKnown RBP17.69■□□□□ 0.42
CASC3-201ENST00000264645 PPFIA3O75145 1194 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 C10orf67Q8IYJ2 551 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 UHRF1BP1Q6BDS2 1440 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 GSDMDP57764 484 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 GABPB1Q06547 395 aaPredicted RBP17.68■□□□□ 0.42
CASC3-201ENST00000264645 WASHC4Q2M389 1173 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
CASC3-201ENST00000264645 SYT1P21579 422 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 HSP90AB3PQ58FF7 597 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 KIF1BPQ96EK5 621 aa17.68■□□□□ 0.42
CASC3-201ENST00000264645 INTS4Q96HW7 963 aaKnown RBP17.68■□□□□ 0.42
CASC3-201ENST00000264645 CBFA2T2O43439 604 aa17.67■□□□□ 0.42
CASC3-201ENST00000264645 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
CASC3-201ENST00000264645 ANAPC15P60006 121 aa17.67■□□□□ 0.42
CASC3-201ENST00000264645 VAMP4O75379 141 aa17.67■□□□□ 0.42
CASC3-201ENST00000264645 CCDC141Q6ZP82 1450 aa17.67■□□□□ 0.42
CASC3-201ENST00000264645 ARHGAP29Q52LW3 1261 aa17.67■□□□□ 0.42
CASC3-201ENST00000264645 PPFIBP1Q86W92 1011 aa17.67■□□□□ 0.42
CASC3-201ENST00000264645 IPO4Q8TEX9 1081 aaKnown RBP17.67■□□□□ 0.42
CASC3-201ENST00000264645 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
CASC3-201ENST00000264645 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
CASC3-201ENST00000264645 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
CASC3-201ENST00000264645 UTP14CQ5TAP6 766 aaKnown RBP17.66■□□□□ 0.42
CASC3-201ENST00000264645 JAKMIP3Q5VZ66 844 aa17.66■□□□□ 0.42
CASC3-201ENST00000264645 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
CASC3-201ENST00000264645 TXLNBQ8N3L3 684 aa17.66■□□□□ 0.42
CASC3-201ENST00000264645 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
CASC3-201ENST00000264645 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms