RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 INTS3Q68E01 1043 aaKnown RBP12.66□□□□□ -0.38
SEC22C-201ENST00000264454 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
SEC22C-201ENST00000264454 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
SEC22C-201ENST00000264454 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
SEC22C-201ENST00000264454 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
SEC22C-201ENST00000264454 IGHDP01880 384 aa12.65□□□□□ -0.38
SEC22C-201ENST00000264454 PHKG2P15735 406 aa12.65□□□□□ -0.38
SEC22C-201ENST00000264454 EIF4A1P60842 406 aaKnown RBP12.65□□□□□ -0.38
SEC22C-201ENST00000264454 HDAC1Q13547 482 aaPredicted RBP12.65□□□□□ -0.38
SEC22C-201ENST00000264454 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
SEC22C-201ENST00000264454 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
SEC22C-201ENST00000264454 EVA1CP58658 441 aa12.64□□□□□ -0.39
SEC22C-201ENST00000264454 DCAF5Q96JK2 942 aa12.64□□□□□ -0.39
SEC22C-201ENST00000264454 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
SEC22C-201ENST00000264454 ROBO1Q9Y6N7 1651 aa12.63□□□□□ -0.39
SEC22C-201ENST00000264454 ABCA3Q99758 1704 aa12.63□□□□□ -0.39
SEC22C-201ENST00000264454 RBM19Q9Y4C8 960 aaKnown RBP12.63□□□□□ -0.39
SEC22C-201ENST00000264454 MEGF6O75095 1541 aa12.62□□□□□ -0.39
SEC22C-201ENST00000264454 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
SEC22C-201ENST00000264454 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
SEC22C-201ENST00000264454 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
SEC22C-201ENST00000264454 IL2RBP14784 551 aa12.61□□□□□ -0.39
SEC22C-201ENST00000264454 ZCRB1Q8TBF4 217 aaKnown RBP12.61□□□□□ -0.39
SEC22C-201ENST00000264454 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
SEC22C-201ENST00000264454 COL22A1Q8NFW1 1626 aaPredicted RBP12.61□□□□□ -0.39
SEC22C-201ENST00000264454 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
SEC22C-201ENST00000264454 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
SEC22C-201ENST00000264454 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
SEC22C-201ENST00000264454 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
SEC22C-201ENST00000264454 CACNA1FO60840 1977 aa12.6□□□□□ -0.39
SEC22C-201ENST00000264454 RGS12O14924 1447 aa12.59□□□□□ -0.39
SEC22C-201ENST00000264454 CYP27B1O15528 508 aa12.59□□□□□ -0.39
SEC22C-201ENST00000264454 FLIIQ13045 1269 aa12.59□□□□□ -0.39
SEC22C-201ENST00000264454 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
SEC22C-201ENST00000264454 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
SEC22C-201ENST00000264454 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
SEC22C-201ENST00000264454 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
SEC22C-201ENST00000264454 SMC5Q8IY18 1101 aa12.58□□□□□ -0.4
SEC22C-201ENST00000264454 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
SEC22C-201ENST00000264454 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
SEC22C-201ENST00000264454 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
SEC22C-201ENST00000264454 KDM6AO15550 1401 aaPredicted RBP12.58□□□□□ -0.4
SEC22C-201ENST00000264454 MRC1P22897 1456 aa12.58□□□□□ -0.4
SEC22C-201ENST00000264454 SCN11AQ9UI33 1791 aa12.58□□□□□ -0.4
SEC22C-201ENST00000264454 ERVV-2B6SEH9 535 aa12.57□□□□□ -0.4
SEC22C-201ENST00000264454 FKBP5Q13451 457 aaPredicted RBP12.57□□□□□ -0.4
SEC22C-201ENST00000264454 LARP1Q6PKG0 1096 aaKnown RBP12.57□□□□□ -0.4
SEC22C-201ENST00000264454 G2E3Q7L622 706 aa12.57□□□□□ -0.4
SEC22C-201ENST00000264454 RPAP2Q8IXW5 612 aaPredicted RBP12.57□□□□□ -0.4
SEC22C-201ENST00000264454 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
SEC22C-201ENST00000264454 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
SEC22C-201ENST00000264454 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
SEC22C-201ENST00000264454 KCNQ3O43525 872 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
SEC22C-201ENST00000264454 PDE4AP27815 886 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 CABP4P57796 275 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 PXDNLA1KZ92 1463 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 GNAI3P08754 354 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
SEC22C-201ENST00000264454 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
SEC22C-201ENST00000264454 RGS3P49796 1198 aa12.55□□□□□ -0.4
SEC22C-201ENST00000264454 ZNF772Q68DY9 489 aaPredicted RBP12.55□□□□□ -0.4
SEC22C-201ENST00000264454 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
SEC22C-201ENST00000264454 CDCA7Q9BWT1 371 aaPredicted RBP12.55□□□□□ -0.4
SEC22C-201ENST00000264454 PHLPP1O60346 1717 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
SEC22C-201ENST00000264454 FAM161AQ3B820 660 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 SLC4A10Q6U841 1118 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 FMNL2Q96PY5 1086 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 JCADQ9P266 1359 aa12.54□□□□□ -0.4
SEC22C-201ENST00000264454 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
SEC22C-201ENST00000264454 F6X3S4 739 aa12.53□□□□□ -0.4
SEC22C-201ENST00000264454 HMMRO75330 724 aa12.53□□□□□ -0.4
SEC22C-201ENST00000264454 NUCB1Q02818 461 aa12.53□□□□□ -0.4
SEC22C-201ENST00000264454 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC22C-201ENST00000264454 THRAP3Q9Y2W1 955 aaKnown RBP12.53□□□□□ -0.4
SEC22C-201ENST00000264454 DDX58O95786 925 aaKnown RBP12.52□□□□□ -0.41
SEC22C-201ENST00000264454 GNAI2P04899 355 aa12.52□□□□□ -0.41
SEC22C-201ENST00000264454 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
SEC22C-201ENST00000264454 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
SEC22C-201ENST00000264454 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
SEC22C-201ENST00000264454 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
SEC22C-201ENST00000264454 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
SEC22C-201ENST00000264454 MEIS3Q99687 375 aa12.51□□□□□ -0.41
SEC22C-201ENST00000264454 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
SEC22C-201ENST00000264454 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
SEC22C-201ENST00000264454 ERBB4Q15303 1308 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 RXRBP28702 533 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 CEP85Q6P2H3 762 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 KSR2Q6VAB6 950 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 SIRT2Q8IXJ6 389 aa12.5□□□□□ -0.41
SEC22C-201ENST00000264454 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms