RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 SIRT2Q8IXJ6 389 aa16.67■□□□□ 0.26
TNFRSF8-201ENST00000263932 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
TNFRSF8-201ENST00000263932 MAP3K5Q99683 1374 aa16.66■□□□□ 0.26
TNFRSF8-201ENST00000263932 ZNF335Q9H4Z2 1342 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF8-201ENST00000263932 TTC5Q8N0Z6 440 aa16.66■□□□□ 0.26
TNFRSF8-201ENST00000263932 NFATC2IPQ8NCF5 419 aa16.66■□□□□ 0.26
TNFRSF8-201ENST00000263932 CHMP3Q9Y3E7 222 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 PTCH1Q13635 1447 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 GNAI2P04899 355 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 ARHGAP45Q92619 1136 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 SURF6O75683 361 aaKnown RBP16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 NUCB1Q02818 461 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 SMC5Q8IY18 1101 aa16.65■□□□□ 0.26
TNFRSF8-201ENST00000263932 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.26
TNFRSF8-201ENST00000263932 USP19O94966 1318 aa16.64■□□□□ 0.25
TNFRSF8-201ENST00000263932 ARHGEF10O15013 1369 aa16.64■□□□□ 0.25
TNFRSF8-201ENST00000263932 GCC1Q96CN9 775 aa16.64■□□□□ 0.25
TNFRSF8-201ENST00000263932 TBC1D2Q9BYX2 928 aa16.64■□□□□ 0.25
TNFRSF8-201ENST00000263932 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
TNFRSF8-201ENST00000263932 PIK3R4Q99570 1358 aa16.64■□□□□ 0.25
TNFRSF8-201ENST00000263932 ITSN1Q15811 1721 aa16.63■□□□□ 0.25
TNFRSF8-201ENST00000263932 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
TNFRSF8-201ENST00000263932 SLIT1O75093 1534 aa16.62■□□□□ 0.25
TNFRSF8-201ENST00000263932 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
TNFRSF8-201ENST00000263932 CCT4P50991 539 aaKnown RBP16.62■□□□□ 0.25
TNFRSF8-201ENST00000263932 NUTM1Q86Y26 1132 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 SIL1Q9H173 461 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 ABCC4O15439 1325 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 NUTM2BA6NNL0 878 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 NUTM2EB1AL46 878 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
TNFRSF8-201ENST00000263932 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 CABP4P57796 275 aa16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 CWF19L2Q2TBE0 894 aaKnown RBP16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
TNFRSF8-201ENST00000263932 DTNBO60941 627 aa16.59■□□□□ 0.25
TNFRSF8-201ENST00000263932 PNMA6EA0A0J9YXQ4 647 aa16.59■□□□□ 0.25
TNFRSF8-201ENST00000263932 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
TNFRSF8-201ENST00000263932 PTPRCP08575 1304 aa16.59■□□□□ 0.25
TNFRSF8-201ENST00000263932 GNAI3P08754 354 aa16.59■□□□□ 0.25
TNFRSF8-201ENST00000263932 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
TNFRSF8-201ENST00000263932 CASC1Q6TDU7 716 aa16.58■□□□□ 0.25
TNFRSF8-201ENST00000263932 PANK2Q9BZ23 570 aa16.58■□□□□ 0.25
TNFRSF8-201ENST00000263932 MAP3K2Q9Y2U5 619 aa16.58■□□□□ 0.25
TNFRSF8-201ENST00000263932 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
TNFRSF8-201ENST00000263932 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF8-201ENST00000263932 ANKRD44Q8N8A2 993 aa16.58■□□□□ 0.24
TNFRSF8-201ENST00000263932 SLAIN2Q9P270 581 aa16.58■□□□□ 0.24
TNFRSF8-201ENST00000263932 SPG7Q9UQ90 795 aa16.58■□□□□ 0.24
TNFRSF8-201ENST00000263932 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 ANKARQ7Z5J8 1434 aa16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 EIF4A1P60842 406 aaKnown RBP16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 TBC1D9Q6ZT07 1266 aa16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 MPNDQ8N594 471 aa16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 NBPF7P0C2Y1 421 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 DNAAF4Q8WXU2 420 aa16.57■□□□□ 0.24
TNFRSF8-201ENST00000263932 GOLGA6L3A6NEY3 463 aa16.56■□□□□ 0.24
TNFRSF8-201ENST00000263932 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
TNFRSF8-201ENST00000263932 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
TNFRSF8-201ENST00000263932 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF8-201ENST00000263932 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
TNFRSF8-201ENST00000263932 TRIM44Q96DX7 344 aaPredicted RBP16.55■□□□□ 0.24
TNFRSF8-201ENST00000263932 CRB1P82279 1406 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 TULP1O00294 542 aaPredicted RBP16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 PA2G4Q9UQ80 394 aaKnown RBP16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 LRRCC1Q9C099 1032 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 DCTPP1Q9H773 170 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 ERBB3P21860 1342 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 CDC45O75419 566 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
TNFRSF8-201ENST00000263932 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
TNFRSF8-201ENST00000263932 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
TNFRSF8-201ENST00000263932 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
TNFRSF8-201ENST00000263932 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
TNFRSF8-201ENST00000263932 BRINP3Q76B58 766 aa16.53■□□□□ 0.24
TNFRSF8-201ENST00000263932 IFNL2Q8IZJ0 200 aa16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 UBE2Q2Q8WVN8 375 aa16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 MYD88Q99836 296 aa16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 NEXNQ0ZGT2 675 aa16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 ANKRD26Q9UPS8 1709 aa16.52■□□□□ 0.24
TNFRSF8-201ENST00000263932 RTL1A6NKG5 1358 aa16.52■□□□□ 0.23
TNFRSF8-201ENST00000263932 C1orf167Q5SNV9 1468 aa16.52■□□□□ 0.23
TNFRSF8-201ENST00000263932 USP16Q9Y5T5 823 aa16.51■□□□□ 0.23
TNFRSF8-201ENST00000263932 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
TNFRSF8-201ENST00000263932 TRAK2O60296 914 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms