RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 BACH2Q9BYV9 841 aa19.99■□□□□ 0.79
VPS26A-201ENST00000263559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.79
VPS26A-201ENST00000263559 SIPA1L3O60292 1781 aaPredicted RBP19.99■□□□□ 0.79
VPS26A-201ENST00000263559 ROBO1Q9Y6N7 1651 aa19.99■□□□□ 0.79
VPS26A-201ENST00000263559 PDZRN3Q9UPQ7 1066 aa19.99■□□□□ 0.79
VPS26A-201ENST00000263559 WDR17Q8IZU2 1322 aa19.98■□□□□ 0.79
VPS26A-201ENST00000263559 PHKG2P15735 406 aa19.98■□□□□ 0.79
VPS26A-201ENST00000263559 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
VPS26A-201ENST00000263559 SCN11AQ9UI33 1791 aa19.97■□□□□ 0.79
VPS26A-201ENST00000263559 COL5A2P05997 1499 aaPredicted RBP19.97■□□□□ 0.79
VPS26A-201ENST00000263559 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
VPS26A-201ENST00000263559 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
VPS26A-201ENST00000263559 PKD1L3Q7Z443 1732 aa19.96■□□□□ 0.79
VPS26A-201ENST00000263559 IFNL2Q8IZJ0 200 aa19.96■□□□□ 0.79
VPS26A-201ENST00000263559 PLEKHG2Q9H7P9 1386 aa19.96■□□□□ 0.79
VPS26A-201ENST00000263559 FLIIQ13045 1269 aa19.95■□□□□ 0.78
VPS26A-201ENST00000263559 KDM6AO15550 1401 aaPredicted RBP19.95■□□□□ 0.78
VPS26A-201ENST00000263559 F6X3S4 739 aa19.95■□□□□ 0.78
VPS26A-201ENST00000263559 CYP27B1O15528 508 aa19.94■□□□□ 0.78
VPS26A-201ENST00000263559 SMC5Q8IY18 1101 aa19.94■□□□□ 0.78
VPS26A-201ENST00000263559 HOXB7P09629 217 aa19.94■□□□□ 0.78
VPS26A-201ENST00000263559 EIF2S2P20042 333 aaKnown RBP19.94■□□□□ 0.78
VPS26A-201ENST00000263559 SLC4A10Q6U841 1118 aa19.92■□□□□ 0.78
VPS26A-201ENST00000263559 STRN4Q9NRL3 753 aa19.92■□□□□ 0.78
VPS26A-201ENST00000263559 FKBP5Q13451 457 aaPredicted RBP19.92■□□□□ 0.78
VPS26A-201ENST00000263559 SLC52A2Q9HAB3 445 aa19.92■□□□□ 0.78
VPS26A-201ENST00000263559 AHDC1Q5TGY3 1603 aaPredicted RBP19.91■□□□□ 0.78
VPS26A-201ENST00000263559 SIRT2Q8IXJ6 389 aa19.91■□□□□ 0.78
VPS26A-201ENST00000263559 EVA1CP58658 441 aa19.91■□□□□ 0.78
VPS26A-201ENST00000263559 LARP1Q6PKG0 1096 aaKnown RBP19.91■□□□□ 0.78
VPS26A-201ENST00000263559 PARP4Q9UKK3 1724 aaKnown RBP19.91■□□□□ 0.78
VPS26A-201ENST00000263559 FAM161AQ3B820 660 aa19.9■□□□□ 0.78
VPS26A-201ENST00000263559 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
VPS26A-201ENST00000263559 CARD10Q9BWT7 1032 aa19.9■□□□□ 0.78
VPS26A-201ENST00000263559 PHAXQ9H814 394 aaKnown RBP19.9■□□□□ 0.78
VPS26A-201ENST00000263559 HEG1Q9ULI3 1381 aa19.9■□□□□ 0.78
VPS26A-201ENST00000263559 DCAF5Q96JK2 942 aa19.9■□□□□ 0.78
VPS26A-201ENST00000263559 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.78
VPS26A-201ENST00000263559 CCT4P50991 539 aaKnown RBP19.89■□□□□ 0.78
VPS26A-201ENST00000263559 C8orf34Q49A92 452 aa19.89■□□□□ 0.78
VPS26A-201ENST00000263559 MEIS3Q99687 375 aa19.89■□□□□ 0.77
VPS26A-201ENST00000263559 CHPF2Q9P2E5 772 aa19.89■□□□□ 0.77
VPS26A-201ENST00000263559 CHMP4AQ9BY43 222 aa19.89■□□□□ 0.77
VPS26A-201ENST00000263559 SLC39A6Q13433 755 aa19.88■□□□□ 0.77
VPS26A-201ENST00000263559 HSP90AB1P08238 724 aaKnown RBP19.88■□□□□ 0.77
VPS26A-201ENST00000263559 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
VPS26A-201ENST00000263559 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
VPS26A-201ENST00000263559 PRAMEF22A3QJZ6 481 aa19.87■□□□□ 0.77
VPS26A-201ENST00000263559 IL2RBP14784 551 aa19.87■□□□□ 0.77
VPS26A-201ENST00000263559 BTG4Q9NY30 223 aa19.86■□□□□ 0.77
VPS26A-201ENST00000263559 MRC1P22897 1456 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 COL22A1Q8NFW1 1626 aaPredicted RBP19.85■□□□□ 0.77
VPS26A-201ENST00000263559 NUCB1Q02818 461 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 GCC1Q96CN9 775 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 ATP10DQ9P241 1426 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 ANXA1P04083 346 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 PCDH11XQ9BZA7 1347 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 PCDH11YQ9BZA8 1340 aa19.85■□□□□ 0.77
VPS26A-201ENST00000263559 ANKRD44Q8N8A2 993 aa19.84■□□□□ 0.77
VPS26A-201ENST00000263559 DBF4Q9UBU7 674 aaPredicted RBP19.84■□□□□ 0.77
VPS26A-201ENST00000263559 N4BP2Q86UW6 1770 aaPredicted RBP19.84■□□□□ 0.77
VPS26A-201ENST00000263559 RPAP2Q8IXW5 612 aaPredicted RBP19.83■□□□□ 0.77
VPS26A-201ENST00000263559 USP35Q9P2H5 1018 aa19.83■□□□□ 0.77
VPS26A-201ENST00000263559 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
VPS26A-201ENST00000263559 CABP4P57796 275 aa19.83■□□□□ 0.76
VPS26A-201ENST00000263559 CEP85Q6P2H3 762 aa19.83■□□□□ 0.76
VPS26A-201ENST00000263559 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
VPS26A-201ENST00000263559 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
VPS26A-201ENST00000263559 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
VPS26A-201ENST00000263559 LNPKQ9C0E8 428 aa19.82■□□□□ 0.76
VPS26A-201ENST00000263559 PXDNLA1KZ92 1463 aa19.82■□□□□ 0.76
VPS26A-201ENST00000263559 ANKRD45Q5TZF3 282 aa19.81■□□□□ 0.76
VPS26A-201ENST00000263559 C5P01031 1676 aa19.81■□□□□ 0.76
VPS26A-201ENST00000263559 COL16A1Q07092 1604 aaPredicted RBP19.81■□□□□ 0.76
VPS26A-201ENST00000263559 PROSER3Q2NL68 480 aa19.81■□□□□ 0.76
VPS26A-201ENST00000263559 ZNF496Q96IT1 587 aaPredicted RBP19.81■□□□□ 0.76
VPS26A-201ENST00000263559 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
VPS26A-201ENST00000263559 DDX54Q8TDD1 881 aaKnown RBP19.8■□□□□ 0.76
VPS26A-201ENST00000263559 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
VPS26A-201ENST00000263559 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
VPS26A-201ENST00000263559 PI4KAP2A4QPH2 592 aa19.79■□□□□ 0.76
VPS26A-201ENST00000263559 TTC5Q8N0Z6 440 aa19.79■□□□□ 0.76
VPS26A-201ENST00000263559 PI4KAP1Q8N8J0 262 aa19.79■□□□□ 0.76
VPS26A-201ENST00000263559 NKX1-1Q15270 411 aaPredicted RBP19.79■□□□□ 0.76
VPS26A-201ENST00000263559 PIP4K2BP78356 416 aa19.79■□□□□ 0.76
VPS26A-201ENST00000263559 MSH5O43196 834 aa19.78■□□□□ 0.76
VPS26A-201ENST00000263559 GNAI2P04899 355 aa19.78■□□□□ 0.76
VPS26A-201ENST00000263559 GNAI3P08754 354 aa19.78■□□□□ 0.76
VPS26A-201ENST00000263559 TOM1O60784 492 aa19.78■□□□□ 0.76
VPS26A-201ENST00000263559 DNAAF4Q8WXU2 420 aa19.78■□□□□ 0.76
VPS26A-201ENST00000263559 USP44Q9H0E7 712 aa19.78■□□□□ 0.76
VPS26A-201ENST00000263559 PDIA6Q15084 440 aa19.77■□□□□ 0.76
VPS26A-201ENST00000263559 SRCIN1Q9C0H9 1055 aa19.77■□□□□ 0.76
VPS26A-201ENST00000263559 HYPKQ9NX55 129 aa19.77■□□□□ 0.76
VPS26A-201ENST00000263559 ADCY9O60503 1353 aa19.77■□□□□ 0.76
VPS26A-201ENST00000263559 ERVV-2B6SEH9 535 aa19.77■□□□□ 0.75
VPS26A-201ENST00000263559 DDX21Q9NR30 783 aaKnown RBP eCLIP19.77■□□□□ 0.75
VPS26A-201ENST00000263559 FMNL2Q96PY5 1086 aa19.76■□□□□ 0.75
VPS26A-201ENST00000263559 SNRPA1P09661 255 aaKnown RBP19.76■□□□□ 0.75
VPS26A-201ENST00000263559 BEND3Q5T5X7 828 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms