RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 ANKRD36BQ8N2N9 1353 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 SFPQP23246 707 aaKnown RBP eCLIP17.32■□□□□ 0.36
PPM1F-201ENST00000263212 UVSSAQ2YD98 709 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 CDK5RAP3Q96JB5 506 aa17.32■□□□□ 0.36
PPM1F-201ENST00000263212 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
PPM1F-201ENST00000263212 CTAGE5O15320 804 aa17.31■□□□□ 0.36
PPM1F-201ENST00000263212 CLCN1P35523 988 aa17.31■□□□□ 0.36
PPM1F-201ENST00000263212 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
PPM1F-201ENST00000263212 WASF1Q92558 559 aa17.31■□□□□ 0.36
PPM1F-201ENST00000263212 CTDP1Q9Y5B0 961 aaPredicted RBP17.31■□□□□ 0.36
PPM1F-201ENST00000263212 SNX21Q969T3 373 aa17.31■□□□□ 0.36
PPM1F-201ENST00000263212 LUC7LQ9NQ29 371 aaKnown RBP17.31■□□□□ 0.36
PPM1F-201ENST00000263212 DDX19AQ9NUU7 478 aaKnown RBP17.31■□□□□ 0.36
PPM1F-201ENST00000263212 F6X3S4 739 aa17.31■□□□□ 0.36
PPM1F-201ENST00000263212 CT47A1Q5JQC4 288 aaPredicted RBP17.31■□□□□ 0.36
PPM1F-201ENST00000263212 PATL2C9JE40 543 aaKnown RBP17.31■□□□□ 0.36
PPM1F-201ENST00000263212 IMMTQ16891 758 aaKnown RBP17.3■□□□□ 0.36
PPM1F-201ENST00000263212 FAM177A1Q8N128 213 aaPredicted RBP17.3■□□□□ 0.36
PPM1F-201ENST00000263212 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
PPM1F-201ENST00000263212 LRRFIP2Q9Y608 721 aaKnown RBP17.3■□□□□ 0.36
PPM1F-201ENST00000263212 TXLNBQ8N3L3 684 aa17.3■□□□□ 0.36
PPM1F-201ENST00000263212 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
PPM1F-201ENST00000263212 KIF18AQ8NI77 898 aa17.3■□□□□ 0.36
PPM1F-201ENST00000263212 RBM42Q9BTD8 480 aaKnown RBP17.3■□□□□ 0.36
PPM1F-201ENST00000263212 HMGB1P09429 215 aaKnown RBP17.29■□□□□ 0.36
PPM1F-201ENST00000263212 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
PPM1F-201ENST00000263212 NEMFO60524 1076 aa17.29■□□□□ 0.36
PPM1F-201ENST00000263212 XRCC6P12956 609 aaKnown RBP eCLIP17.29■□□□□ 0.36
PPM1F-201ENST00000263212 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
PPM1F-201ENST00000263212 NOS1P29475 1434 aa17.29■□□□□ 0.36
PPM1F-201ENST00000263212 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
PPM1F-201ENST00000263212 MTMR7Q9Y216 660 aa17.29■□□□□ 0.36
PPM1F-201ENST00000263212 STX6O43752 255 aa17.28■□□□□ 0.36
PPM1F-201ENST00000263212 FLIIQ13045 1269 aa17.28■□□□□ 0.36
PPM1F-201ENST00000263212 KCNH5Q8NCM2 988 aa17.28■□□□□ 0.36
PPM1F-201ENST00000263212 DNAAF4Q8WXU2 420 aa17.28■□□□□ 0.36
PPM1F-201ENST00000263212 MBIPQ9NS73 344 aa17.28■□□□□ 0.36
PPM1F-201ENST00000263212 PRAG1Q86YV5 1406 aa17.28■□□□□ 0.36
PPM1F-201ENST00000263212 BOLA2Q9H3K6 86 aa17.27■□□□□ 0.36
PPM1F-201ENST00000263212 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.35
PPM1F-201ENST00000263212 ZSCAN12O43309 604 aa17.27■□□□□ 0.35
PPM1F-201ENST00000263212 ZSCAN23Q3MJ62 389 aa17.27■□□□□ 0.35
PPM1F-201ENST00000263212 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.35
PPM1F-201ENST00000263212 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.35
PPM1F-201ENST00000263212 UBE2HP62256 183 aa17.27■□□□□ 0.35
PPM1F-201ENST00000263212 TMCO3Q6UWJ1 677 aa17.27■□□□□ 0.35
PPM1F-201ENST00000263212 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 CLIP2Q9UDT6 1046 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 ADGRL1O94910 1474 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 CAVIN2O95810 425 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 LRSAM1Q6UWE0 723 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 EVI5LQ96CN4 794 aa17.26■□□□□ 0.35
PPM1F-201ENST00000263212 TTC21BQ7Z4L5 1316 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 ADCY5O95622 1261 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 CEP131Q9UPN4 1083 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 DYNC1I1O14576 645 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 DEF6Q9H4E7 631 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 IQCEQ6IPM2 695 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 GDPD2Q9HCC8 539 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
PPM1F-201ENST00000263212 ARHGAP29Q52LW3 1261 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 CCDC181Q5TID7 509 aa17.25■□□□□ 0.35
PPM1F-201ENST00000263212 IDI1Q13907 227 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 AMOTQ4VCS5 1084 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 PRIMPOLQ96LW4 560 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 TSPYL1Q9H0U9 437 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 TNNT1P13805 278 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 RDXP35241 583 aaKnown RBP17.24■□□□□ 0.35
PPM1F-201ENST00000263212 TCOF1Q13428 1488 aaKnown RBP17.24■□□□□ 0.35
PPM1F-201ENST00000263212 TDO2P48775 406 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 TMX3Q96JJ7 454 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 CGNQ9P2M7 1197 aaKnown RBP17.24■□□□□ 0.35
PPM1F-201ENST00000263212 DBF4Q9UBU7 674 aaPredicted RBP17.24■□□□□ 0.35
PPM1F-201ENST00000263212 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 ODF2Q5BJF6 829 aa17.24■□□□□ 0.35
PPM1F-201ENST00000263212 SDSP20132 328 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 RBM27Q9P2N5 1060 aaKnown RBP17.23■□□□□ 0.35
PPM1F-201ENST00000263212 GJB2P29033 226 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 ANAPC15P60006 121 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 CKAP2LQ8IYA6 745 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 GSDMDP57764 484 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 GOLGA6L10A6NI86 522 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
PPM1F-201ENST00000263212 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
PPM1F-201ENST00000263212 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
PPM1F-201ENST00000263212 DDX54Q8TDD1 881 aaKnown RBP17.22■□□□□ 0.35
PPM1F-201ENST00000263212 TESK2Q96S53 571 aa17.22■□□□□ 0.35
PPM1F-201ENST00000263212 ERLIN2O94905 339 aa17.22■□□□□ 0.35
PPM1F-201ENST00000263212 SMC5Q8IY18 1101 aa17.22■□□□□ 0.35
PPM1F-201ENST00000263212 TOM1L2Q6ZVM7 507 aa17.22■□□□□ 0.35
PPM1F-201ENST00000263212 CCDC8Q9H0W5 538 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms