RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 NME9Q86XW9 330 aa15.06■□□□□ 0
TTC39A-202ENST00000262676 GRIN2AQ12879 1464 aa15.06■□□□□ 0
TTC39A-202ENST00000262676 RFC4P35249 363 aa15.06■□□□□ 0
TTC39A-202ENST00000262676 TMX1Q9H3N1 280 aa15.06■□□□□ 0
TTC39A-202ENST00000262676 KIF21BO75037 1637 aa15.06■□□□□ 0
TTC39A-202ENST00000262676 STAMBPO95630 424 aa15.05■□□□□ 0
TTC39A-202ENST00000262676 GPTP24298 496 aa15.05■□□□□ 0
TTC39A-202ENST00000262676 NUP133Q8WUM0 1156 aa15.05■□□□□ 0
TTC39A-202ENST00000262676 CCDC158Q5M9N0 1113 aa15.05■□□□□ 0
TTC39A-202ENST00000262676 WDR70Q9NW82 654 aa15.05■□□□□ 0
TTC39A-202ENST00000262676 ZNF652Q9Y2D9 606 aa15.05■□□□□ 0
TTC39A-202ENST00000262676 MCM2P49736 904 aa15.05■□□□□ -0
TTC39A-202ENST00000262676 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ -0
TTC39A-202ENST00000262676 FKBP4Q02790 459 aaKnown RBP eCLIP15.05■□□□□ -0
TTC39A-202ENST00000262676 CCDC69A6NI79 296 aa15.05■□□□□ -0
TTC39A-202ENST00000262676 TMOD2Q9NZR1 351 aa15.05■□□□□ -0
TTC39A-202ENST00000262676 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ -0
TTC39A-202ENST00000262676 IGHMBP2P38935 993 aaKnown RBP15.04■□□□□ -0
TTC39A-202ENST00000262676 PUS7Q96PZ0 661 aaKnown RBP15.04■□□□□ -0
TTC39A-202ENST00000262676 RAI14Q9P0K7 980 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 EIF5P55010 431 aaKnown RBP15.04■□□□□ -0
TTC39A-202ENST00000262676 CGNQ9P2M7 1197 aaKnown RBP15.04■□□□□ -0
TTC39A-202ENST00000262676 ADAMTS8Q9UP79 889 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 CASQ1P31415 396 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 ABCF2Q9UG63 623 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 CYP46A1Q9Y6A2 500 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 ARHGAP29Q52LW3 1261 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 HECW1Q76N89 1606 aa15.04■□□□□ -0
TTC39A-202ENST00000262676 MAGI1Q96QZ7 1491 aaPredicted RBP15.03■□□□□ -0
TTC39A-202ENST00000262676 C6orf229H3BNL8 230 aa15.03■□□□□ -0
TTC39A-202ENST00000262676 ZFP91Q96JP5 570 aaPredicted RBP15.03■□□□□ -0
TTC39A-202ENST00000262676 UPF3BQ9BZI7 483 aaKnown RBP15.03■□□□□ -0
TTC39A-202ENST00000262676 FANCAO15360 1455 aa15.03■□□□□ -0
TTC39A-202ENST00000262676 SERPINA10Q9UK55 444 aa15.03■□□□□ -0
TTC39A-202ENST00000262676 LRPPRCP42704 1394 aaKnown RBP15.03■□□□□ -0
TTC39A-202ENST00000262676 SPATA32Q96LK8 384 aa15.03■□□□□ -0
TTC39A-202ENST00000262676 KRT85P78386 507 aa15.03■□□□□ -0
TTC39A-202ENST00000262676 HIP1O00291 1037 aa15.02■□□□□ -0
TTC39A-202ENST00000262676 ANAPC15P60006 121 aa15.02■□□□□ -0
TTC39A-202ENST00000262676 EXOSC9Q06265 439 aaKnown RBP15.02■□□□□ -0
TTC39A-202ENST00000262676 LARP1BQ659C4 914 aaKnown RBP15.02■□□□□ -0
TTC39A-202ENST00000262676 ARAP1Q96P48 1450 aa15.02■□□□□ -0
TTC39A-202ENST00000262676 TNRQ92752 1358 aa15.02■□□□□ -0
TTC39A-202ENST00000262676 PIBF1Q8WXW3 757 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 IQGAP2Q13576 1575 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 WDR33Q9C0J8 1336 aaKnown RBP15.02□□□□□ -0.01
TTC39A-202ENST00000262676 IFFO1Q0D2I5 559 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 CCDC178Q5BJE1 867 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 DNA2P51530 1060 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 CAMK4Q16566 473 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 MCM10Q7L590 875 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 TRIM22Q8IYM9 498 aa15.02□□□□□ -0.01
TTC39A-202ENST00000262676 DESP17661 470 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 NBPF14Q5TI25 921 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 NUP62CLQ9H1M0 184 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 DDX11Q96FC9 970 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 ESPNB1AK53 854 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 K7ELQ4 463 aaPredicted RBP15.01□□□□□ -0.01
TTC39A-202ENST00000262676 TFCP2L1Q9NZI6 479 aa15.01□□□□□ -0.01
TTC39A-202ENST00000262676 SOGA3Q5TF21 947 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 PPM1EQ8WY54 764 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 KAT6BQ8WYB5 2073 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 CFAP100Q494V2 611 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 CEP57L1Q8IYX8 460 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 GTF2F1P35269 517 aaKnown RBP eCLIP15□□□□□ -0.01
TTC39A-202ENST00000262676 GNAT3A8MTJ3 354 aa15□□□□□ -0.01
TTC39A-202ENST00000262676 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
TTC39A-202ENST00000262676 GBP3Q9H0R5 595 aa14.99□□□□□ -0.01
TTC39A-202ENST00000262676 LRP2BPQ9P2M1 347 aa14.99□□□□□ -0.01
TTC39A-202ENST00000262676 ZNF397Q8NF99 534 aaPredicted RBP14.99□□□□□ -0.01
TTC39A-202ENST00000262676 PNISRQ8TF01 805 aaKnown RBP14.99□□□□□ -0.01
TTC39A-202ENST00000262676 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
TTC39A-202ENST00000262676 THUMPD2Q9BTF0 503 aaKnown RBP14.99□□□□□ -0.01
TTC39A-202ENST00000262676 SMTNL1A8MU46 457 aa14.99□□□□□ -0.01
TTC39A-202ENST00000262676 POLD1P28340 1107 aa14.99□□□□□ -0.01
TTC39A-202ENST00000262676 ZHX1Q9UKY1 873 aaPredicted RBP14.99□□□□□ -0.01
TTC39A-202ENST00000262676 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.98□□□□□ -0.01
TTC39A-202ENST00000262676 ASXL2Q76L83 1435 aa14.98□□□□□ -0.01
TTC39A-202ENST00000262676 GSTTP1A0A1W2PQM5 241 aa14.98□□□□□ -0.01
TTC39A-202ENST00000262676 PTPN14Q15678 1187 aa14.98□□□□□ -0.01
TTC39A-202ENST00000262676 CTNNBL1Q8WYA6 563 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-202ENST00000262676 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
TTC39A-202ENST00000262676 URI1O94763 535 aaPredicted RBP14.98□□□□□ -0.01
TTC39A-202ENST00000262676 TRIM21P19474 475 aaKnown RBP14.98□□□□□ -0.01
TTC39A-202ENST00000262676 ANKRD1Q15327 319 aa14.98□□□□□ -0.01
TTC39A-202ENST00000262676 URB2Q14146 1524 aaKnown RBP14.98□□□□□ -0.01
TTC39A-202ENST00000262676 MICALCLQ6ZW33 695 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 SRRTQ9BXP5 876 aaKnown RBP14.97□□□□□ -0.01
TTC39A-202ENST00000262676 ZBTB3Q9H5J0 574 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 SYCE3A1L190 88 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 SPA17Q15506 151 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 MAP9Q49MG5 647 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 CALCOCO1Q9P1Z2 691 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 LUZP1Q86V48 1076 aa14.97□□□□□ -0.01
TTC39A-202ENST00000262676 BMP2KQ9NSY1 1161 aaPredicted RBP14.97□□□□□ -0.01
TTC39A-202ENST00000262676 SMC1AQ14683 1233 aaKnown RBP14.97□□□□□ -0.01
TTC39A-202ENST00000262676 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms