RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 NUDCQ9Y266 331 aa15.46■□□□□ 0.07
PFDN1-201ENST00000261813 PLEKHG2Q9H7P9 1386 aa15.45■□□□□ 0.06
PFDN1-201ENST00000261813 BCL9O00512 1426 aa15.45■□□□□ 0.06
PFDN1-201ENST00000261813 PYGBP11216 843 aa15.45■□□□□ 0.06
PFDN1-201ENST00000261813 CYP27B1O15528 508 aa15.44■□□□□ 0.06
PFDN1-201ENST00000261813 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
PFDN1-201ENST00000261813 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
PFDN1-201ENST00000261813 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
PFDN1-201ENST00000261813 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
PFDN1-201ENST00000261813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.06
PFDN1-201ENST00000261813 PCDH11XQ9BZA7 1347 aa15.44■□□□□ 0.06
PFDN1-201ENST00000261813 PCDH11YQ9BZA8 1340 aa15.44■□□□□ 0.06
PFDN1-201ENST00000261813 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
PFDN1-201ENST00000261813 CCDC184Q52MB2 194 aa15.43■□□□□ 0.06
PFDN1-201ENST00000261813 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
PFDN1-201ENST00000261813 CIZ1Q9ULV3 898 aaPredicted RBP15.43■□□□□ 0.06
PFDN1-201ENST00000261813 SPG7Q9UQ90 795 aa15.43■□□□□ 0.06
PFDN1-201ENST00000261813 PCDHB13Q9Y5F0 798 aa15.42■□□□□ 0.06
PFDN1-201ENST00000261813 LRP5O75197 1615 aa15.42■□□□□ 0.06
PFDN1-201ENST00000261813 PLEKHO1Q53GL0 409 aaPredicted RBP15.41■□□□□ 0.06
PFDN1-201ENST00000261813 PHKG2P15735 406 aa15.4■□□□□ 0.06
PFDN1-201ENST00000261813 PRKAR2BP31323 418 aa15.4■□□□□ 0.06
PFDN1-201ENST00000261813 AMOTQ4VCS5 1084 aa15.4■□□□□ 0.06
PFDN1-201ENST00000261813 TNS1Q9HBL0 1735 aaKnown RBP15.39■□□□□ 0.05
PFDN1-201ENST00000261813 FCHSD2O94868 740 aa15.39■□□□□ 0.05
PFDN1-201ENST00000261813 TRIM37O94972 964 aa15.39■□□□□ 0.05
PFDN1-201ENST00000261813 ACSBG1Q96GR2 724 aa15.39■□□□□ 0.05
PFDN1-201ENST00000261813 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
PFDN1-201ENST00000261813 EN1Q05925 392 aaPredicted RBP15.38■□□□□ 0.05
PFDN1-201ENST00000261813 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
PFDN1-201ENST00000261813 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
PFDN1-201ENST00000261813 ZNF530Q6P9A1 599 aaPredicted RBP15.38■□□□□ 0.05
PFDN1-201ENST00000261813 PTF1AQ7RTS3 328 aa15.38■□□□□ 0.05
PFDN1-201ENST00000261813 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
PFDN1-201ENST00000261813 IFNL2Q8IZJ0 200 aa15.38■□□□□ 0.05
PFDN1-201ENST00000261813 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
PFDN1-201ENST00000261813 NHSQ6T4R5 1651 aa15.38■□□□□ 0.05
PFDN1-201ENST00000261813 DOT1LQ8TEK3 1739 aa15.38■□□□□ 0.05
PFDN1-201ENST00000261813 KCNQ2O43526 872 aa15.37■□□□□ 0.05
PFDN1-201ENST00000261813 DCBLD2Q96PD2 775 aa15.37■□□□□ 0.05
PFDN1-201ENST00000261813 TOGARAM1Q9Y4F4 1720 aa15.37■□□□□ 0.05
PFDN1-201ENST00000261813 PLEKHF1Q96S99 279 aa15.36■□□□□ 0.05
PFDN1-201ENST00000261813 KDM6AO15550 1401 aaPredicted RBP15.36■□□□□ 0.05
PFDN1-201ENST00000261813 R3HDM1Q15032 1099 aaKnown RBP15.36■□□□□ 0.05
PFDN1-201ENST00000261813 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
PFDN1-201ENST00000261813 BCL11BQ9C0K0 894 aaPredicted RBP15.36■□□□□ 0.05
PFDN1-201ENST00000261813 MRS2Q9HD23 443 aa15.36■□□□□ 0.05
PFDN1-201ENST00000261813 AKAP4Q5JQC9 854 aa15.35■□□□□ 0.05
PFDN1-201ENST00000261813 C1orf141Q5JVX7 400 aa15.35■□□□□ 0.05
PFDN1-201ENST00000261813 ASTLQ6HA08 431 aaPredicted RBP15.35■□□□□ 0.05
PFDN1-201ENST00000261813 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
PFDN1-201ENST00000261813 TRPC6Q9Y210 931 aa15.35■□□□□ 0.05
PFDN1-201ENST00000261813 PRIM1P49642 420 aaKnown RBP15.34■□□□□ 0.05
PFDN1-201ENST00000261813 GAS2L2Q8NHY3 880 aa15.34■□□□□ 0.05
PFDN1-201ENST00000261813 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.04
PFDN1-201ENST00000261813 TIE1P35590 1138 aa15.33■□□□□ 0.04
PFDN1-201ENST00000261813 MPRIPQ6WCQ1 1025 aa15.33■□□□□ 0.04
PFDN1-201ENST00000261813 DCAF5Q96JK2 942 aa15.33■□□□□ 0.04
PFDN1-201ENST00000261813 APBA3O96018 575 aa15.32■□□□□ 0.04
PFDN1-201ENST00000261813 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
PFDN1-201ENST00000261813 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
PFDN1-201ENST00000261813 SYTL4Q96C24 671 aaPredicted RBP15.32■□□□□ 0.04
PFDN1-201ENST00000261813 MAP3K5Q99683 1374 aa15.31■□□□□ 0.04
PFDN1-201ENST00000261813 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
PFDN1-201ENST00000261813 EZH2Q15910 746 aaKnown RBP15.31■□□□□ 0.04
PFDN1-201ENST00000261813 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
PFDN1-201ENST00000261813 BTAF1O14981 1849 aa15.31■□□□□ 0.04
PFDN1-201ENST00000261813 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
PFDN1-201ENST00000261813 ATMINO43313 823 aaPredicted RBP15.3■□□□□ 0.04
PFDN1-201ENST00000261813 LGR6Q9HBX8 967 aa15.3■□□□□ 0.04
PFDN1-201ENST00000261813 ITGB4P16144 1822 aa15.3■□□□□ 0.04
PFDN1-201ENST00000261813 SCN11AQ9UI33 1791 aa15.29■□□□□ 0.04
PFDN1-201ENST00000261813 GNAT3A8MTJ3 354 aa15.29■□□□□ 0.04
PFDN1-201ENST00000261813 RNMTO43148 476 aaKnown RBP15.29■□□□□ 0.04
PFDN1-201ENST00000261813 NEFMP07197 916 aa15.29■□□□□ 0.04
PFDN1-201ENST00000261813 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
PFDN1-201ENST00000261813 PIGBQ92521 554 aa15.29■□□□□ 0.04
PFDN1-201ENST00000261813 BMP2KQ9NSY1 1161 aaPredicted RBP15.29■□□□□ 0.04
PFDN1-201ENST00000261813 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
PFDN1-201ENST00000261813 NFE2L2Q16236 605 aa15.28■□□□□ 0.04
PFDN1-201ENST00000261813 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
PFDN1-201ENST00000261813 CAMKK2Q96RR4 588 aa15.28■□□□□ 0.04
PFDN1-201ENST00000261813 PCDHB8Q9UN66 801 aa15.28■□□□□ 0.04
PFDN1-201ENST00000261813 MRC1P22897 1456 aa15.28■□□□□ 0.04
PFDN1-201ENST00000261813 PLSCR1O15162 318 aa15.27■□□□□ 0.04
PFDN1-201ENST00000261813 IL17REQ8NFR9 667 aa15.27■□□□□ 0.04
PFDN1-201ENST00000261813 TMOD3Q9NYL9 352 aa15.27■□□□□ 0.04
PFDN1-201ENST00000261813 RGPD3A6NKT7 1758 aaPredicted RBP15.27■□□□□ 0.03
PFDN1-201ENST00000261813 RGPD4Q7Z3J3 1758 aa15.27■□□□□ 0.03
PFDN1-201ENST00000261813 CABP4P57796 275 aa15.26■□□□□ 0.03
PFDN1-201ENST00000261813 NBPF14Q5TI25 921 aa15.26■□□□□ 0.03
PFDN1-201ENST00000261813 VIRMAQ69YN4 1812 aaKnown RBP15.26■□□□□ 0.03
PFDN1-201ENST00000261813 CEMIPQ8WUJ3 1361 aa15.26■□□□□ 0.03
PFDN1-201ENST00000261813 TMPOP42166 694 aaKnown RBP15.25■□□□□ 0.03
PFDN1-201ENST00000261813 NFATC2IPQ8NCF5 419 aa15.25■□□□□ 0.03
PFDN1-201ENST00000261813 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
PFDN1-201ENST00000261813 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
PFDN1-201ENST00000261813 KAT6BQ8WYB5 2073 aa15.25■□□□□ 0.03
PFDN1-201ENST00000261813 RREB1Q92766 1687 aa15.25■□□□□ 0.03
PFDN1-201ENST00000261813 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms