RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 CALR3Q96L12 384 aaKnown RBP15.24■□□□□ 0.03
TMEM260-201ENST00000261556 TIAM1Q13009 1591 aa15.24■□□□□ 0.03
TMEM260-201ENST00000261556 CDK13Q14004 1512 aaKnown RBP15.24■□□□□ 0.03
TMEM260-201ENST00000261556 KIAA0754O94854 1291 aa15.24■□□□□ 0.03
TMEM260-201ENST00000261556 CASTP20810 708 aaKnown RBP15.24■□□□□ 0.03
TMEM260-201ENST00000261556 TBC1D9Q6ZT07 1266 aa15.24■□□□□ 0.03
TMEM260-201ENST00000261556 PPM1EQ8WY54 764 aa15.24■□□□□ 0.03
TMEM260-201ENST00000261556 RAI14Q9P0K7 980 aa15.24■□□□□ 0.03
TMEM260-201ENST00000261556 SMC3Q9UQE7 1217 aa15.24■□□□□ 0.03
TMEM260-201ENST00000261556 YY1AP1Q9H869 796 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 PDRG1Q9NUG6 133 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 SMC2O95347 1197 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 CDR1P51861 262 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 DNAJC21Q5F1R6 531 aaKnown RBP15.23■□□□□ 0.03
TMEM260-201ENST00000261556 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
TMEM260-201ENST00000261556 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 IFIT2P09913 472 aaKnown RBP15.23■□□□□ 0.03
TMEM260-201ENST00000261556 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
TMEM260-201ENST00000261556 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
TMEM260-201ENST00000261556 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 RIC3Q7Z5B4 369 aa15.23■□□□□ 0.03
TMEM260-201ENST00000261556 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 FBXO38Q6PIJ6 1188 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 TNMDQ9H2S6 317 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 PLB1Q6P1J6 1458 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.03
TMEM260-201ENST00000261556 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 CEP57Q86XR8 500 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 SATB1Q01826 763 aa15.22■□□□□ 0.03
TMEM260-201ENST00000261556 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
TMEM260-201ENST00000261556 PDE6BP35913 854 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 SNW1Q13573 536 aaKnown RBP15.21■□□□□ 0.03
TMEM260-201ENST00000261556 ISM2Q6H9L7 571 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 ERO1AQ96HE7 468 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 SKILP12757 684 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 SLC20A2Q08357 652 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 RABEP2Q9H5N1 569 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 EHBP1L1Q8N3D4 1523 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 DAPK1P53355 1430 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 EIF3JO75822 258 aaKnown RBP15.21■□□□□ 0.03
TMEM260-201ENST00000261556 RLBP1P12271 317 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
TMEM260-201ENST00000261556 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
TMEM260-201ENST00000261556 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
TMEM260-201ENST00000261556 MRVI1Q9Y6F6 885 aa15.21■□□□□ 0.03
TMEM260-201ENST00000261556 MORC2Q9Y6X9 1032 aaPredicted RBP15.2■□□□□ 0.02
TMEM260-201ENST00000261556 FRMD3A2A2Y4 597 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 CREBRFQ8IUR6 639 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 KIAA1524Q8TCG1 905 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
TMEM260-201ENST00000261556 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
TMEM260-201ENST00000261556 GUCY2CP25092 1073 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 EXOSC9Q06265 439 aaKnown RBP15.2■□□□□ 0.02
TMEM260-201ENST00000261556 RASSF8Q8NHQ8 419 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
TMEM260-201ENST00000261556 GADD45BO75293 160 aaPredicted RBP15.19■□□□□ 0.02
TMEM260-201ENST00000261556 FAM43BQ6ZT52 329 aaPredicted RBP15.19■□□□□ 0.02
TMEM260-201ENST00000261556 ARFGAP3Q9NP61 516 aa15.19■□□□□ 0.02
TMEM260-201ENST00000261556 NUP62CLQ9H1M0 184 aa15.19■□□□□ 0.02
TMEM260-201ENST00000261556 SPINK5Q9NQ38 1064 aaPredicted RBP15.19■□□□□ 0.02
TMEM260-201ENST00000261556 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
TMEM260-201ENST00000261556 PEX19P40855 299 aa15.19■□□□□ 0.02
TMEM260-201ENST00000261556 NAIPQ13075 1403 aa15.19■□□□□ 0.02
TMEM260-201ENST00000261556 DHX29Q7Z478 1369 aaKnown RBP15.19■□□□□ 0.02
TMEM260-201ENST00000261556 LARP6Q9BRS8 491 aaKnown RBP15.18■□□□□ 0.02
TMEM260-201ENST00000261556 NAA25Q14CX7 972 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 SF3A1Q15459 793 aaKnown RBP15.18■□□□□ 0.02
TMEM260-201ENST00000261556 MAP3K11Q16584 847 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 LUZP1Q86V48 1076 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 ANKRD7Q92527 254 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 TSR2Q969E8 191 aaKnown RBP15.18■□□□□ 0.02
TMEM260-201ENST00000261556 PLEKHA4Q9H4M7 779 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
TMEM260-201ENST00000261556 CD109Q6YHK3 1445 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 ECM2O94769 699 aaPredicted RBP15.18■□□□□ 0.02
TMEM260-201ENST00000261556 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 DNAI1Q9UI46 699 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
TMEM260-201ENST00000261556 SMARCA5O60264 1052 aaPredicted RBP15.17■□□□□ 0.02
TMEM260-201ENST00000261556 RARSP54136 660 aaKnown RBP15.17■□□□□ 0.02
TMEM260-201ENST00000261556 LIG3P49916 1009 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
TMEM260-201ENST00000261556 CNPY2Q9Y2B0 182 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
TMEM260-201ENST00000261556 WAPLQ7Z5K2 1190 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 ERBINQ96RT1 1412 aa15.17■□□□□ 0.02
TMEM260-201ENST00000261556 ANKRD30BQ9BXX2 1392 aa15.16■□□□□ 0.02
TMEM260-201ENST00000261556 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
TMEM260-201ENST00000261556 CYP2C19P33261 490 aa15.16■□□□□ 0.02
TMEM260-201ENST00000261556 PDILTQ8N807 584 aa15.16■□□□□ 0.02
TMEM260-201ENST00000261556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.16■□□□□ 0.02
TMEM260-201ENST00000261556 ZKSCAN1P17029 563 aaPredicted RBP15.16■□□□□ 0.02
TMEM260-201ENST00000261556 RRS1Q15050 365 aaKnown RBP15.16■□□□□ 0.02
TMEM260-201ENST00000261556 DDX11Q96FC9 970 aa15.16■□□□□ 0.02
TMEM260-201ENST00000261556 SEC31AO94979 1220 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms