RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 KIF2CQ99661 725 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 NFAT5O94916 1531 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 LTN1O94822 1766 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 MSNP26038 577 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 ZNF445P59923 1031 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 PSME1Q06323 249 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 IP6K1Q92551 441 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 TSPYL4Q9UJ04 414 aa13.31□□□□□ -0.28
CHRNA1-201ENST00000261007 MAP3K5Q99683 1374 aa13.3□□□□□ -0.28
CHRNA1-201ENST00000261007 CHD1LQ86WJ1 897 aa13.3□□□□□ -0.28
CHRNA1-201ENST00000261007 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
CHRNA1-201ENST00000261007 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
CHRNA1-201ENST00000261007 C14orf37Q86TY3 774 aa13.29□□□□□ -0.28
CHRNA1-201ENST00000261007 ZNF500O60304 480 aaPredicted RBP13.28□□□□□ -0.28
CHRNA1-201ENST00000261007 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
CHRNA1-201ENST00000261007 SLIT3O75094 1523 aa13.28□□□□□ -0.28
CHRNA1-201ENST00000261007 RPAP2Q8IXW5 612 aaPredicted RBP13.27□□□□□ -0.28
CHRNA1-201ENST00000261007 RGS12O14924 1447 aa13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 MST1RQ04912 1400 aa13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 BAG4O95429 457 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 MTERF4Q7Z6M4 381 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 STK31Q9BXU1 1019 aa13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 DDX49Q9Y6V7 483 aaKnown RBP13.27□□□□□ -0.29
CHRNA1-201ENST00000261007 MCM5P33992 734 aa13.26□□□□□ -0.29
CHRNA1-201ENST00000261007 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
CHRNA1-201ENST00000261007 SSFA2P28290 1259 aa13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 CCT4P50991 539 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 NUCB2P80303 420 aa13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 FOXO3O43524 673 aa13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 TAF7Q15545 349 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
CHRNA1-201ENST00000261007 DCCP43146 1447 aa13.24□□□□□ -0.29
CHRNA1-201ENST00000261007 MSH6P52701 1360 aa13.24□□□□□ -0.29
CHRNA1-201ENST00000261007 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
CHRNA1-201ENST00000261007 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
CHRNA1-201ENST00000261007 ANKRD44Q8N8A2 993 aa13.24□□□□□ -0.29
CHRNA1-201ENST00000261007 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 C19orf44Q9H6X5 657 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 FAM208AQ9UK61 1670 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 TRPM3Q9HCF6 1732 aaPredicted RBP13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 AMOTQ4VCS5 1084 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 TBC1D9Q6ZT07 1266 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 OVOS2A0A0G2JMS6 1433 aa13.23□□□□□ -0.29
CHRNA1-201ENST00000261007 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 HMMRO75330 724 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 HOXB7P09629 217 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 RABEP1Q15276 862 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 MED1Q15648 1581 aaPredicted RBP13.22□□□□□ -0.29
CHRNA1-201ENST00000261007 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 C1orf115Q9H7X2 142 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 N4BP2Q86UW6 1770 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 ATP10DQ9P241 1426 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 DYNC1I1O14576 645 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 CDC45O75419 566 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 ZSCAN23Q3MJ62 389 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 ARHGEF25Q86VW2 580 aa13.21□□□□□ -0.29
CHRNA1-201ENST00000261007 GCP02774 474 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 AKAP4Q5JQC9 854 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 PRDM4Q9UKN5 801 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 ZKSCAN5Q9Y2L8 839 aa13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 R3HCC1Q9Y3T6 440 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-201ENST00000261007 GNAI3P08754 354 aa13.19□□□□□ -0.3
CHRNA1-201ENST00000261007 CEP85Q6P2H3 762 aa13.19□□□□□ -0.3
CHRNA1-201ENST00000261007 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
CHRNA1-201ENST00000261007 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
CHRNA1-201ENST00000261007 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
CHRNA1-201ENST00000261007 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
CHRNA1-201ENST00000261007 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 ABCC6O95255 1503 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 FLIIQ13045 1269 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 MCTP1Q6DN14 999 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 CCDC39Q9UFE4 941 aa13.18□□□□□ -0.3
CHRNA1-201ENST00000261007 ALS2Q96Q42 1657 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms