RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 GUCY1B3Q02153 619 aa20■□□□□ 0.79
SORT1-201ENST00000256637 PPP4R3AQ6IN85 833 aa20■□□□□ 0.79
SORT1-201ENST00000256637 DAPK1P53355 1430 aa20■□□□□ 0.79
SORT1-201ENST00000256637 BTG4Q9NY30 223 aa20■□□□□ 0.79
SORT1-201ENST00000256637 A0A087WZG4 1122 aa19.99■□□□□ 0.79
SORT1-201ENST00000256637 PDZRN3Q9UPQ7 1066 aa19.99■□□□□ 0.79
SORT1-201ENST00000256637 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
SORT1-201ENST00000256637 LMOD1P29536 600 aaPredicted RBP19.99■□□□□ 0.79
SORT1-201ENST00000256637 MPNDQ8N594 471 aa19.99■□□□□ 0.79
SORT1-201ENST00000256637 JAKMIP1Q96N16 626 aaKnown RBP19.99■□□□□ 0.79
SORT1-201ENST00000256637 WASLO00401 505 aaPredicted RBP19.99■□□□□ 0.79
SORT1-201ENST00000256637 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
SORT1-201ENST00000256637 CUL5Q93034 780 aa19.98■□□□□ 0.79
SORT1-201ENST00000256637 TROQ12816 1431 aaPredicted RBP19.98■□□□□ 0.79
SORT1-201ENST00000256637 ZBED9Q6R2W3 1325 aa19.98■□□□□ 0.79
SORT1-201ENST00000256637 FANCAO15360 1455 aa19.98■□□□□ 0.79
SORT1-201ENST00000256637 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
SORT1-201ENST00000256637 CYP46A1Q9Y6A2 500 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 FAM83GA6ND36 823 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 ME1P48163 572 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 NAPBQ9H115 298 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 SPC24Q8NBT2 197 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 RUFY1Q96T51 708 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 ACEP12821 1306 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 ADGRF5Q8IZF2 1346 aa19.97■□□□□ 0.79
SORT1-201ENST00000256637 MAP3K9P80192 1104 aa19.96■□□□□ 0.79
SORT1-201ENST00000256637 NEFHP12036 1026 aa19.96■□□□□ 0.79
SORT1-201ENST00000256637 NIP7Q9Y221 180 aaKnown RBP eCLIP19.96■□□□□ 0.79
SORT1-201ENST00000256637 MAGI1Q96QZ7 1491 aaPredicted RBP19.96■□□□□ 0.79
SORT1-201ENST00000256637 IMMTQ16891 758 aaKnown RBP19.96■□□□□ 0.79
SORT1-201ENST00000256637 DENND4BO75064 1496 aaPredicted RBP19.96■□□□□ 0.79
SORT1-201ENST00000256637 TNNT3P45378 269 aaPredicted RBP19.96■□□□□ 0.79
SORT1-201ENST00000256637 DEF6Q9H4E7 631 aa19.96■□□□□ 0.79
SORT1-201ENST00000256637 PPP1R42Q7Z4L9 355 aa19.96■□□□□ 0.79
SORT1-201ENST00000256637 ENOX2Q16206 610 aaKnown RBP19.95■□□□□ 0.78
SORT1-201ENST00000256637 TNRQ92752 1358 aa19.95■□□□□ 0.78
SORT1-201ENST00000256637 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
SORT1-201ENST00000256637 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
SORT1-201ENST00000256637 APBA3O96018 575 aa19.95■□□□□ 0.78
SORT1-201ENST00000256637 MMRN2Q9H8L6 949 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 AKAP2Q9Y2D5 859 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 CAMSAP2Q08AD1 1489 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 EP400NLQ6ZTU2 488 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 FAM177A1Q8N128 213 aaPredicted RBP19.94■□□□□ 0.78
SORT1-201ENST00000256637 SIRT1Q96EB6 747 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 NFE2L2Q16236 605 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 LARP1Q6PKG0 1096 aaKnown RBP19.94■□□□□ 0.78
SORT1-201ENST00000256637 KINO60870 393 aaKnown RBP19.94■□□□□ 0.78
SORT1-201ENST00000256637 CKAP2LQ8IYA6 745 aa19.94■□□□□ 0.78
SORT1-201ENST00000256637 IFNL2Q8IZJ0 200 aa19.93■□□□□ 0.78
SORT1-201ENST00000256637 GNPATO15228 680 aa19.93■□□□□ 0.78
SORT1-201ENST00000256637 NFKBIBQ15653 356 aa19.93■□□□□ 0.78
SORT1-201ENST00000256637 NOL7Q9UMY1 257 aaKnown RBP19.93■□□□□ 0.78
SORT1-201ENST00000256637 BEGAINQ9BUH8 593 aa19.93■□□□□ 0.78
SORT1-201ENST00000256637 AMOTQ4VCS5 1084 aa19.92■□□□□ 0.78
SORT1-201ENST00000256637 RTCBQ9Y3I0 505 aaKnown RBP19.92■□□□□ 0.78
SORT1-201ENST00000256637 CABP5Q9NP86 173 aa19.92■□□□□ 0.78
SORT1-201ENST00000256637 ATAD2Q6PL18 1390 aa19.92■□□□□ 0.78
SORT1-201ENST00000256637 LDHAL6AQ6ZMR3 332 aa19.92■□□□□ 0.78
SORT1-201ENST00000256637 OGFOD1Q8N543 542 aa19.92■□□□□ 0.78
SORT1-201ENST00000256637 NOS1P29475 1434 aa19.92■□□□□ 0.78
SORT1-201ENST00000256637 TMPOP42166 694 aaKnown RBP19.92■□□□□ 0.78
SORT1-201ENST00000256637 CASTP20810 708 aaKnown RBP19.92■□□□□ 0.78
SORT1-201ENST00000256637 ZNF396Q96N95 335 aaPredicted RBP19.92■□□□□ 0.78
SORT1-201ENST00000256637 HAND2P61296 217 aa19.91■□□□□ 0.78
SORT1-201ENST00000256637 PDRG1Q9NUG6 133 aa19.91■□□□□ 0.78
SORT1-201ENST00000256637 STK32BQ9NY57 414 aa19.91■□□□□ 0.78
SORT1-201ENST00000256637 HDAC9Q9UKV0 1011 aa19.91■□□□□ 0.78
SORT1-201ENST00000256637 MAP3K12Q12852 859 aa19.91■□□□□ 0.78
SORT1-201ENST00000256637 CCDC173Q0VFZ6 552 aa19.91■□□□□ 0.78
SORT1-201ENST00000256637 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 SERPINC1P01008 464 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 HSP90AB3PQ58FF7 597 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 NAT10Q9H0A0 1025 aaKnown RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 LRRFIP2Q9Y608 721 aaKnown RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 FILIP1LQ4L180 1135 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 JDP2Q8WYK2 163 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 TNNT1P13805 278 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 NOM1Q5C9Z4 860 aaKnown RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 SP4Q02446 784 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 CDC5LQ99459 802 aaKnown RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 USP21Q9UK80 565 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 MYCP01106 439 aaPredicted RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 ZNF287Q9HBT7 754 aa19.9■□□□□ 0.78
SORT1-201ENST00000256637 CWC25Q9NXE8 425 aaPredicted RBP19.9■□□□□ 0.78
SORT1-201ENST00000256637 PRPF40AO75400 957 aaKnown RBP19.89■□□□□ 0.78
SORT1-201ENST00000256637 NF2P35240 595 aa19.89■□□□□ 0.77
SORT1-201ENST00000256637 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
SORT1-201ENST00000256637 GOLIM4O00461 696 aa19.89■□□□□ 0.77
SORT1-201ENST00000256637 CSPG5O95196 566 aa19.89■□□□□ 0.77
SORT1-201ENST00000256637 TMEM57Q8N5G2 664 aa19.88■□□□□ 0.77
SORT1-201ENST00000256637 PCF11O94913 1555 aaKnown RBP19.88■□□□□ 0.77
SORT1-201ENST00000256637 RPGRIP1LQ68CZ1 1315 aa19.88■□□□□ 0.77
SORT1-201ENST00000256637 TSHZ3Q63HK5 1081 aa19.88■□□□□ 0.77
SORT1-201ENST00000256637 UBE3BQ7Z3V4 1068 aa19.88■□□□□ 0.77
SORT1-201ENST00000256637 SLF2Q8IX21 1173 aa19.88■□□□□ 0.77
SORT1-201ENST00000256637 TRIM21P19474 475 aaKnown RBP19.87■□□□□ 0.77
SORT1-201ENST00000256637 CCDC181Q5TID7 509 aa19.87■□□□□ 0.77
SORT1-201ENST00000256637 HLA-DOAP06340 250 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms