RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 WDR43Q15061 677 aaKnown RBP eCLIP4.61□□□□□ -1.67
RTTN-201ENST00000255674 SPEF2Q9C093 1822 aa4.61□□□□□ -1.67
RTTN-201ENST00000255674 TMEM87AQ8NBN3 555 aa4.61□□□□□ -1.67
RTTN-201ENST00000255674 ZBTB40Q9NUA8 1239 aa4.61□□□□□ -1.67
RTTN-201ENST00000255674 PTMAP06454 111 aaKnown RBP4.61□□□□□ -1.67
RTTN-201ENST00000255674 KCNJ6P48051 423 aa4.61□□□□□ -1.67
RTTN-201ENST00000255674 SSH3Q8TE77 659 aa4.61□□□□□ -1.67
RTTN-201ENST00000255674 EMILIN1Q9Y6C2 1016 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 ABCA3Q99758 1704 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 PIP4K2BP78356 416 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 METTL16Q86W50 562 aaKnown RBP4.6□□□□□ -1.67
RTTN-201ENST00000255674 SNX21Q969T3 373 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 MMP14P50281 582 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 NBPF1Q3BBV0 1214 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 TRIM44Q96DX7 344 aaPredicted RBP4.6□□□□□ -1.67
RTTN-201ENST00000255674 TRIM35Q9UPQ4 493 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 DNTTIP2Q5QJE6 756 aaKnown RBP4.6□□□□□ -1.67
RTTN-201ENST00000255674 LAS1LQ9Y4W2 734 aaKnown RBP4.6□□□□□ -1.67
RTTN-201ENST00000255674 ZNF804BA4D1E1 1349 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 HNRNPUQ00839 825 aaKnown RBP eCLIP4.6□□□□□ -1.67
RTTN-201ENST00000255674 HOXA7P31268 230 aaPredicted RBP4.6□□□□□ -1.67
RTTN-201ENST00000255674 TNNT2P45379 298 aaPredicted RBP4.6□□□□□ -1.67
RTTN-201ENST00000255674 MRIQ9BWK5 157 aa4.6□□□□□ -1.67
RTTN-201ENST00000255674 PAPLNO95428 1278 aa4.59□□□□□ -1.67
RTTN-201ENST00000255674 C16orf71Q8IYS4 520 aaPredicted RBP4.59□□□□□ -1.67
RTTN-201ENST00000255674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.59□□□□□ -1.67
RTTN-201ENST00000255674 USP35Q9P2H5 1018 aa4.59□□□□□ -1.67
RTTN-201ENST00000255674 TNRC6CQ9HCJ0 1690 aaKnown RBP4.59□□□□□ -1.67
RTTN-201ENST00000255674 CDHR2Q9BYE9 1310 aa4.59□□□□□ -1.67
RTTN-201ENST00000255674 BBXQ8WY36 941 aaPredicted RBP4.59□□□□□ -1.67
RTTN-201ENST00000255674 CCDC136Q96JN2 1154 aa4.59□□□□□ -1.67
RTTN-201ENST00000255674 SPATA31A3Q5VYP0 1347 aa4.59□□□□□ -1.67
RTTN-201ENST00000255674 TCEAL9Q9UHQ7 104 aa4.59□□□□□ -1.67
RTTN-201ENST00000255674 CIZ1Q9ULV3 898 aaPredicted RBP4.59□□□□□ -1.67
RTTN-201ENST00000255674 MYO3BQ8WXR4 1341 aa4.59□□□□□ -1.68
RTTN-201ENST00000255674 PLIN4Q96Q06 1357 aa4.59□□□□□ -1.68
RTTN-201ENST00000255674 HMGB2P26583 209 aaKnown RBP4.59□□□□□ -1.68
RTTN-201ENST00000255674 PALLDQ8WX93 1383 aa4.59□□□□□ -1.68
RTTN-201ENST00000255674 FRAT2O75474 233 aaPredicted RBP4.58□□□□□ -1.68
RTTN-201ENST00000255674 RSPH6AQ9H0K4 717 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 OS9Q13438 667 aaPredicted RBP4.58□□□□□ -1.68
RTTN-201ENST00000255674 TBC1D2Q9BYX2 928 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 HOXA10P31260 410 aaPredicted RBP4.58□□□□□ -1.68
RTTN-201ENST00000255674 THEMISQ8N1K5 641 aaPredicted RBP4.58□□□□□ -1.68
RTTN-201ENST00000255674 TMC1Q8TDI8 760 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 AFDNP55196 1824 aaKnown RBP4.58□□□□□ -1.68
RTTN-201ENST00000255674 FAM155BO75949 473 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 FGD1P98174 961 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 LMNB2Q03252 620 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 SLC10A5Q5PT55 438 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 NRAPQ86VF7 1730 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 SHANK3Q9BYB0 1731 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 PLCB2Q00722 1185 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 TRIM34Q9BYJ4 488 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 CA8P35219 290 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 EVA1CP58658 441 aa4.58□□□□□ -1.68
RTTN-201ENST00000255674 TJP1Q07157 1748 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 GIGYF1O75420 1035 aaPredicted RBP4.57□□□□□ -1.68
RTTN-201ENST00000255674 CCDC97Q96F63 343 aaPredicted RBP4.57□□□□□ -1.68
RTTN-201ENST00000255674 GOLGA6L22H0YM25 854 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 BMP2KLQ5H9B9 411 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 RAD50Q92878 1312 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 QSER1Q2KHR3 1735 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 ADRA2BP18089 450 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 NECTIN2Q92692 538 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 SYTL4Q96C24 671 aaPredicted RBP4.57□□□□□ -1.68
RTTN-201ENST00000255674 COPRSQ9NQ92 184 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 MED23Q9ULK4 1368 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 RFX1P22670 979 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 KIF1BO60333 1816 aa4.57□□□□□ -1.68
RTTN-201ENST00000255674 DDX60Q8IY21 1712 aaKnown RBP4.57□□□□□ -1.68
RTTN-201ENST00000255674 DCTPP1Q9H773 170 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 ANAPC15P60006 121 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 FNBP4Q8N3X1 1017 aaPredicted RBP4.56□□□□□ -1.68
RTTN-201ENST00000255674 NOC3LQ8WTT2 800 aaKnown RBP4.56□□□□□ -1.68
RTTN-201ENST00000255674 FAM163AQ96GL9 167 aaPredicted RBP4.56□□□□□ -1.68
RTTN-201ENST00000255674 FOXD4L1Q9NU39 408 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 PODXL2Q9NZ53 605 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 FSD2A1L4K1 749 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 SLC4A3P48751 1232 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 MAP3K10Q02779 954 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 ARHGAP27Q6ZUM4 889 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 LRRC37AA6NMS7 1700 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 KCTD17Q8N5Z5 321 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 EVC2Q86UK5 1308 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 ALDH1L1O75891 902 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 CBX1P83916 185 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 CASC1Q6TDU7 716 aa4.56□□□□□ -1.68
RTTN-201ENST00000255674 VAMP4O75379 141 aa4.55□□□□□ -1.68
RTTN-201ENST00000255674 C19orf44Q9H6X5 657 aa4.55□□□□□ -1.68
RTTN-201ENST00000255674 MAP4K4O95819 1239 aaPredicted RBP4.55□□□□□ -1.68
RTTN-201ENST00000255674 RFX5P48382 616 aaPredicted RBP4.55□□□□□ -1.68
RTTN-201ENST00000255674 HDGFP51858 240 aaKnown RBP4.55□□□□□ -1.68
RTTN-201ENST00000255674 RPAP2Q8IXW5 612 aaPredicted RBP4.55□□□□□ -1.68
RTTN-201ENST00000255674 XIRP1Q702N8 1843 aaKnown RBP4.55□□□□□ -1.68
RTTN-201ENST00000255674 E9PSI1 815 aa4.55□□□□□ -1.68
RTTN-201ENST00000255674 CHMP4BP1P59074 171 aa4.55□□□□□ -1.68
RTTN-201ENST00000255674 BECN1Q14457 450 aa4.55□□□□□ -1.68
RTTN-201ENST00000255674 CNNM4Q6P4Q7 775 aa4.55□□□□□ -1.68
RTTN-201ENST00000255674 CERKQ8TCT0 537 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms