RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
NDFIP1-201ENST00000253814 CCDC183Q5T5S1 534 aa20.97■□□□□ 0.95
NDFIP1-201ENST00000253814 TCEANC2Q96MN5 208 aa20.97■□□□□ 0.95
NDFIP1-201ENST00000253814 AACSQ86V21 672 aa20.97■□□□□ 0.95
NDFIP1-201ENST00000253814 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
NDFIP1-201ENST00000253814 PREX2Q70Z35 1606 aa20.97■□□□□ 0.95
NDFIP1-201ENST00000253814 PUS7Q96PZ0 661 aaKnown RBP20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 TNMDQ9H2S6 317 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 ATP7AQ04656 1500 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 CPA1P15085 419 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 KRT85P78386 507 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 TPD52L1Q16890 204 aaPredicted RBP20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 FMNL2Q96PY5 1086 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 TFIP11Q9UBB9 837 aaKnown RBP20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 PPP1R42Q7Z4L9 355 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 KIF3AQ9Y496 699 aa20.96■□□□□ 0.95
NDFIP1-201ENST00000253814 SBNO2Q9Y2G9 1366 aa20.95■□□□□ 0.95
NDFIP1-201ENST00000253814 IL13P35225 146 aa20.95■□□□□ 0.94
NDFIP1-201ENST00000253814 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
NDFIP1-201ENST00000253814 STX6O43752 255 aa20.95■□□□□ 0.94
NDFIP1-201ENST00000253814 DNAJC2Q99543 621 aaKnown RBP20.95■□□□□ 0.94
NDFIP1-201ENST00000253814 GNAT3A8MTJ3 354 aa20.94■□□□□ 0.94
NDFIP1-201ENST00000253814 C17orf53Q8N3J3 647 aaPredicted RBP20.94■□□□□ 0.94
NDFIP1-201ENST00000253814 DDX11Q96FC9 970 aa20.94■□□□□ 0.94
NDFIP1-201ENST00000253814 NECAB1Q8N987 351 aa20.94■□□□□ 0.94
NDFIP1-201ENST00000253814 NEUROD6Q96NK8 337 aa20.94■□□□□ 0.94
NDFIP1-201ENST00000253814 LIMCH1Q9UPQ0 1083 aa20.94■□□□□ 0.94
NDFIP1-201ENST00000253814 TRPM2O94759 1503 aa20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 KDM4AO75164 1064 aa20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 KIF1BPQ96EK5 621 aa20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 NUP62CLQ9H1M0 184 aa20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 ZHX1Q9UKY1 873 aaPredicted RBP20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 PPFIA3O75145 1194 aa20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 ZNF445P59923 1031 aa20.93■□□□□ 0.94
NDFIP1-201ENST00000253814 MYO5CQ9NQX4 1742 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 ZMYM3Q14202 1370 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 NPATQ14207 1427 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 GADD45BO75293 160 aaPredicted RBP20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 PSMA5P28066 241 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 PSME1Q06323 249 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 BLOC1S2Q6QNY1 142 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 GPT2Q8TD30 523 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 NOL7Q9UMY1 257 aaKnown RBP20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 ACEP12821 1306 aa20.92■□□□□ 0.94
NDFIP1-201ENST00000253814 PDCP20941 246 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 GJB2P29033 226 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 TSC1Q92574 1164 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 SPATA32Q96LK8 384 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 RAB11FIP3O75154 756 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 CCDC73Q6ZRK6 1079 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 SDF4Q9BRK5 362 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 BOLA2Q9H3K6 86 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 FILIP1Q7Z7B0 1213 aa20.91■□□□□ 0.94
NDFIP1-201ENST00000253814 CHMLP26374 656 aa20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 MTHFSDQ2M296 383 aaKnown RBP20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 ABCC4O15439 1325 aa20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 SPDYE4A6NLX3 237 aa20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 DDX58O95786 925 aaKnown RBP20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 PALD1Q9ULE6 856 aa20.9■□□□□ 0.94
NDFIP1-201ENST00000253814 ZNF530Q6P9A1 599 aaPredicted RBP20.89■□□□□ 0.93
NDFIP1-201ENST00000253814 PNMA6EA0A0J9YXQ4 647 aa20.89■□□□□ 0.93
NDFIP1-201ENST00000253814 DNM1Q05193 864 aaKnown RBP20.89■□□□□ 0.93
NDFIP1-201ENST00000253814 MAP3K11Q16584 847 aa20.89■□□□□ 0.93
NDFIP1-201ENST00000253814 HOMER1Q86YM7 354 aa20.89■□□□□ 0.93
NDFIP1-201ENST00000253814 YTHDC2Q9H6S0 1430 aaKnown RBP20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 PI4KAP2A4QPH2 592 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 NOLC1Q14978 699 aaKnown RBP eCLIP20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 PI4KAP1Q8N8J0 262 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 CDC42BPBQ9Y5S2 1711 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 RHPN1Q8TCX5 695 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 RBM33Q96EV2 1170 aaKnown RBP20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 C16orf45Q96MC5 204 aaPredicted RBP20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 GLRX3O76003 335 aaKnown RBP20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 MYL6BP14649 208 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 TPM4P67936 248 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 PDCL2Q8N4E4 241 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 PPP1R9BQ96SB3 815 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 ABCC1P33527 1531 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 CLTCL1P53675 1640 aa20.88■□□□□ 0.93
NDFIP1-201ENST00000253814 TAF7LQ5H9L4 462 aa20.87■□□□□ 0.93
NDFIP1-201ENST00000253814 DYNC1I1O14576 645 aa20.87■□□□□ 0.93
NDFIP1-201ENST00000253814 ZSCAN22P10073 491 aaPredicted RBP20.87■□□□□ 0.93
NDFIP1-201ENST00000253814 MCM5P33992 734 aa20.87■□□□□ 0.93
NDFIP1-201ENST00000253814 CCAR2Q8N163 923 aaKnown RBP20.87■□□□□ 0.93
NDFIP1-201ENST00000253814 RIMS2Q9UQ26 1411 aa20.87■□□□□ 0.93
NDFIP1-201ENST00000253814 KIF2CQ99661 725 aa20.86■□□□□ 0.93
NDFIP1-201ENST00000253814 NSFL1CQ9UNZ2 370 aaKnown RBP20.86■□□□□ 0.93
NDFIP1-201ENST00000253814 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
NDFIP1-201ENST00000253814 AK2P54819 239 aa20.86■□□□□ 0.93
NDFIP1-201ENST00000253814 UBE2HP62256 183 aa20.86■□□□□ 0.93
NDFIP1-201ENST00000253814 MADDQ8WXG6 1647 aa20.85■□□□□ 0.93
NDFIP1-201ENST00000253814 ATP8B2P98198 1209 aa20.85■□□□□ 0.93
NDFIP1-201ENST00000253814 CREBRFQ8IUR6 639 aa20.85■□□□□ 0.93
NDFIP1-201ENST00000253814 TOMM22Q9NS69 142 aa20.85■□□□□ 0.93
NDFIP1-201ENST00000253814 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms