RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PHLPP1O60346 1717 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 TULP1O00294 542 aaPredicted RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 LRP6O75581 1613 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 NWD2Q9ULI1 1742 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 CD2BP2O95400 341 aaKnown RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 MSNP26038 577 aaKnown RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 PODXL2Q9NZ53 605 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 ROBO1Q9Y6N7 1651 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 AFDNP55196 1824 aaKnown RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 LAMB2P55268 1798 aa5.15□□□□□ -1.58
UBE4A-201ENST00000252108 HTATSF1O43719 755 aaKnown RBP5.15□□□□□ -1.58
UBE4A-201ENST00000252108 SRPK2P78362 688 aaKnown RBP5.15□□□□□ -1.58
UBE4A-201ENST00000252108 STK26Q9P289 416 aa5.15□□□□□ -1.58
UBE4A-201ENST00000252108 COL15A1P39059 1388 aa5.15□□□□□ -1.58
UBE4A-201ENST00000252108 FAM83GA6ND36 823 aa5.15□□□□□ -1.58
UBE4A-201ENST00000252108 COL16A1Q07092 1604 aaPredicted RBP5.15□□□□□ -1.58
UBE4A-201ENST00000252108 NRAPQ86VF7 1730 aa5.15□□□□□ -1.58
UBE4A-201ENST00000252108 SPEF2Q9C093 1822 aa5.15□□□□□ -1.58
UBE4A-201ENST00000252108 TNNT2P45379 298 aaPredicted RBP5.15□□□□□ -1.59
UBE4A-201ENST00000252108 USP42Q9H9J4 1324 aaKnown RBP5.15□□□□□ -1.59
UBE4A-201ENST00000252108 CDK11BP21127 795 aaKnown RBP5.15□□□□□ -1.59
UBE4A-201ENST00000252108 THUMPD2Q9BTF0 503 aaKnown RBP5.15□□□□□ -1.59
UBE4A-201ENST00000252108 LMOD2Q6P5Q4 547 aa5.15□□□□□ -1.59
UBE4A-201ENST00000252108 KDM6AO15550 1401 aaPredicted RBP5.14□□□□□ -1.59
UBE4A-201ENST00000252108 PLEKHM2Q8IWE5 1019 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 ANKRD44Q8N8A2 993 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 UBE2Q2Q8WVN8 375 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 BCL2L13Q9BXK5 485 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 TMX4Q9H1E5 349 aaPredicted RBP5.14□□□□□ -1.59
UBE4A-201ENST00000252108 RRP9O43818 475 aaKnown RBP5.14□□□□□ -1.59
UBE4A-201ENST00000252108 GNAI1P63096 354 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 HSP90AB2PQ58FF8 381 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 PTPRCP08575 1304 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 SYAP1Q96A49 352 aaPredicted RBP5.14□□□□□ -1.59
UBE4A-201ENST00000252108 ITGB4P16144 1822 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 C1orf167Q5SNV9 1468 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 ECM29Q5VYK3 1845 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 HSP90AA2PQ14568 343 aaPredicted RBP5.14□□□□□ -1.59
UBE4A-201ENST00000252108 RRS1Q15050 365 aaKnown RBP5.14□□□□□ -1.59
UBE4A-201ENST00000252108 CEP85Q6P2H3 762 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 DOCK2Q92608 1830 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 CSPP1Q1MSJ5 1256 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 SNRKQ9NRH2 765 aa5.14□□□□□ -1.59
UBE4A-201ENST00000252108 UTYO14607 1347 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 LMOD3Q0VAK6 560 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 SAFB2Q14151 953 aaKnown RBP eCLIP5.13□□□□□ -1.59
UBE4A-201ENST00000252108 MTHFSDQ2M296 383 aaKnown RBP5.13□□□□□ -1.59
UBE4A-201ENST00000252108 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.13□□□□□ -1.59
UBE4A-201ENST00000252108 CHD1LQ86WJ1 897 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 EYA1Q99502 592 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 TNS2Q63HR2 1409 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 GCC1Q96CN9 775 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 HOXC9P31274 260 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 SLKQ9H2G2 1235 aaPredicted RBP5.13□□□□□ -1.59
UBE4A-201ENST00000252108 ADCY9O60503 1353 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 POLA2Q14181 598 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 KRT24Q2M2I5 525 aa5.13□□□□□ -1.59
UBE4A-201ENST00000252108 NPHP4O75161 1426 aaPredicted RBP5.13□□□□□ -1.59
UBE4A-201ENST00000252108 AMOTL2Q9Y2J4 779 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 FRAT2O75474 233 aaPredicted RBP5.12□□□□□ -1.59
UBE4A-201ENST00000252108 MCCP23508 829 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 NUCB2P80303 420 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 IL17REQ8NFR9 667 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 C22orf23Q9BZE7 217 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.12□□□□□ -1.59
UBE4A-201ENST00000252108 STAP2Q9UGK3 403 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 COL5A3P25940 1745 aaPredicted RBP5.12□□□□□ -1.59
UBE4A-201ENST00000252108 MAP3K5Q99683 1374 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 PHF14O94880 888 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 KCNA6P17658 529 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 CCDC173Q0VFZ6 552 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 KCNB2Q92953 911 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 POGKQ9P215 609 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 MEGF6O75095 1541 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 SLIT2O94813 1529 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 MCM4P33991 863 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 SF3B2Q13435 895 aaKnown RBP5.12□□□□□ -1.59
UBE4A-201ENST00000252108 TWISTNBQ3B726 338 aaPredicted RBP5.12□□□□□ -1.59
UBE4A-201ENST00000252108 SMC4Q9NTJ3 1288 aa5.12□□□□□ -1.59
UBE4A-201ENST00000252108 MTX1Q13505 466 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 BRPF3Q9ULD4 1205 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 BCORQ6W2J9 1755 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 FOXO3O43524 673 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 SLC4A3P48751 1232 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 CHMP4AQ9BY43 222 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 AKAP11Q9UKA4 1901 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 TRAK2O60296 914 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 HMOX1P09601 288 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 COG3Q96JB2 828 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 KIAA1551Q9HCM1 1747 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 CPDO75976 1380 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 CEBPAP49715 358 aaPredicted RBP5.11□□□□□ -1.59
UBE4A-201ENST00000252108 RAB3GAP1Q15042 981 aa5.11□□□□□ -1.59
UBE4A-201ENST00000252108 ANO8Q9HCE9 1232 aaPredicted RBP5.11□□□□□ -1.59
UBE4A-201ENST00000252108 DCTN1Q14203 1278 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 TBC1D9Q6ZT07 1266 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 G2E3Q7L622 706 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.1□□□□□ -1.59
UBE4A-201ENST00000252108 PKNOX2Q96KN3 472 aa5.1□□□□□ -1.59
UBE4A-201ENST00000252108 IL25Q9H293 177 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms