RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 CYP27B1O15528 508 aa17■□□□□ 0.31
RFPL3-201ENST00000249007 PIGBQ92521 554 aa17■□□□□ 0.31
RFPL3-201ENST00000249007 RNF181Q9P0P0 153 aa17■□□□□ 0.31
RFPL3-201ENST00000249007 RTL1A6NKG5 1358 aa17■□□□□ 0.31
RFPL3-201ENST00000249007 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
RFPL3-201ENST00000249007 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
RFPL3-201ENST00000249007 CCDC87Q9NVE4 849 aa16.99■□□□□ 0.31
RFPL3-201ENST00000249007 ARFGEF1Q9Y6D6 1849 aa16.99■□□□□ 0.31
RFPL3-201ENST00000249007 NLGN1Q8N2Q7 840 aa16.99■□□□□ 0.31
RFPL3-201ENST00000249007 TMF1P82094 1093 aa16.98■□□□□ 0.31
RFPL3-201ENST00000249007 ITPK1Q13572 414 aa16.97■□□□□ 0.31
RFPL3-201ENST00000249007 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
RFPL3-201ENST00000249007 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
RFPL3-201ENST00000249007 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
RFPL3-201ENST00000249007 PIM2Q9P1W9 311 aa16.96■□□□□ 0.31
RFPL3-201ENST00000249007 KCNA3P22001 575 aa16.95■□□□□ 0.3
RFPL3-201ENST00000249007 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
RFPL3-201ENST00000249007 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
RFPL3-201ENST00000249007 C4AP0C0L4 1744 aa16.95■□□□□ 0.3
RFPL3-201ENST00000249007 DALRD3Q5D0E6 543 aaKnown RBP16.94■□□□□ 0.3
RFPL3-201ENST00000249007 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
RFPL3-201ENST00000249007 PARP3Q9Y6F1 533 aa16.94■□□□□ 0.3
RFPL3-201ENST00000249007 ASAP1Q9ULH1 1129 aa16.93■□□□□ 0.3
RFPL3-201ENST00000249007 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
RFPL3-201ENST00000249007 SBF1O95248 1867 aa16.92■□□□□ 0.3
RFPL3-201ENST00000249007 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
RFPL3-201ENST00000249007 NKX1-1Q15270 411 aaPredicted RBP16.92■□□□□ 0.3
RFPL3-201ENST00000249007 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
RFPL3-201ENST00000249007 GYS1P13807 737 aa16.91■□□□□ 0.3
RFPL3-201ENST00000249007 ADRA2BP18089 450 aa16.9■□□□□ 0.3
RFPL3-201ENST00000249007 HSP90AB2PQ58FF8 381 aa16.9■□□□□ 0.3
RFPL3-201ENST00000249007 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
RFPL3-201ENST00000249007 INSRP06213 1382 aa16.9■□□□□ 0.3
RFPL3-201ENST00000249007 RFC4P35249 363 aa16.89■□□□□ 0.29
RFPL3-201ENST00000249007 PUS7Q96PZ0 661 aaKnown RBP16.89■□□□□ 0.29
RFPL3-201ENST00000249007 PCDH10Q9P2E7 1040 aa16.89■□□□□ 0.29
RFPL3-201ENST00000249007 GLTPD2A6NH11 291 aa16.87■□□□□ 0.29
RFPL3-201ENST00000249007 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
RFPL3-201ENST00000249007 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
RFPL3-201ENST00000249007 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
RFPL3-201ENST00000249007 FLT4P35916 1363 aa16.86■□□□□ 0.29
RFPL3-201ENST00000249007 KDRP35968 1356 aa16.86■□□□□ 0.29
RFPL3-201ENST00000249007 FOXN1O15353 648 aa16.86■□□□□ 0.29
RFPL3-201ENST00000249007 CHRNA5P30532 468 aa16.86■□□□□ 0.29
RFPL3-201ENST00000249007 RASSF7Q02833 373 aa16.86■□□□□ 0.29
RFPL3-201ENST00000249007 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
RFPL3-201ENST00000249007 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
RFPL3-201ENST00000249007 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
RFPL3-201ENST00000249007 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
RFPL3-201ENST00000249007 GGNBP2Q9H3C7 697 aa16.85■□□□□ 0.29
RFPL3-201ENST00000249007 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
RFPL3-201ENST00000249007 LMNB1P20700 586 aa16.84■□□□□ 0.29
RFPL3-201ENST00000249007 FAM161AQ3B820 660 aa16.84■□□□□ 0.29
RFPL3-201ENST00000249007 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
RFPL3-201ENST00000249007 CNTNAP4Q9C0A0 1308 aa16.84■□□□□ 0.29
RFPL3-201ENST00000249007 KIF24Q5T7B8 1368 aa16.83■□□□□ 0.29
RFPL3-201ENST00000249007 FYB1O15117 783 aa16.83■□□□□ 0.28
RFPL3-201ENST00000249007 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
RFPL3-201ENST00000249007 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
RFPL3-201ENST00000249007 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
RFPL3-201ENST00000249007 DDR1Q08345 913 aa16.81■□□□□ 0.28
RFPL3-201ENST00000249007 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
RFPL3-201ENST00000249007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
RFPL3-201ENST00000249007 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
RFPL3-201ENST00000249007 NCAPD2Q15021 1401 aa16.81■□□□□ 0.28
RFPL3-201ENST00000249007 ZNF831Q5JPB2 1677 aa16.8■□□□□ 0.28
RFPL3-201ENST00000249007 PHKG2P15735 406 aa16.8■□□□□ 0.28
RFPL3-201ENST00000249007 CTCFP49711 727 aaPredicted RBP16.8■□□□□ 0.28
RFPL3-201ENST00000249007 FKBP8Q14318 412 aa16.8■□□□□ 0.28
RFPL3-201ENST00000249007 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
RFPL3-201ENST00000249007 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
RFPL3-201ENST00000249007 NEUROD1Q13562 356 aa16.8■□□□□ 0.28
RFPL3-201ENST00000249007 SRP68Q9UHB9 627 aaKnown RBP16.8■□□□□ 0.28
RFPL3-201ENST00000249007 TIAM2Q8IVF5 1701 aa16.79■□□□□ 0.28
RFPL3-201ENST00000249007 POTECB2RU33 542 aa16.78■□□□□ 0.28
RFPL3-201ENST00000249007 USP42Q9H9J4 1324 aaKnown RBP16.78■□□□□ 0.28
RFPL3-201ENST00000249007 CNTNAP1P78357 1384 aa16.78■□□□□ 0.28
RFPL3-201ENST00000249007 DPY19L2Q6NUT2 758 aa16.77■□□□□ 0.28
RFPL3-201ENST00000249007 ABHD8Q96I13 439 aa16.77■□□□□ 0.28
RFPL3-201ENST00000249007 TONSLQ96HA7 1378 aa16.77■□□□□ 0.27
RFPL3-201ENST00000249007 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
RFPL3-201ENST00000249007 CHADLQ6NUI6 762 aa16.76■□□□□ 0.27
RFPL3-201ENST00000249007 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
RFPL3-201ENST00000249007 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
RFPL3-201ENST00000249007 LBX1P52954 281 aa16.75■□□□□ 0.27
RFPL3-201ENST00000249007 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
RFPL3-201ENST00000249007 CRKLP46109 303 aaKnown RBP16.74■□□□□ 0.27
RFPL3-201ENST00000249007 TESK2Q96S53 571 aa16.74■□□□□ 0.27
RFPL3-201ENST00000249007 ERVV-2B6SEH9 535 aa16.73■□□□□ 0.27
RFPL3-201ENST00000249007 EYA1Q99502 592 aa16.73■□□□□ 0.27
RFPL3-201ENST00000249007 NFKBIEO00221 500 aa16.73■□□□□ 0.27
RFPL3-201ENST00000249007 TM4SF1P30408 202 aa16.73■□□□□ 0.27
RFPL3-201ENST00000249007 MLLT1Q03111 559 aaPredicted RBP16.73■□□□□ 0.27
RFPL3-201ENST00000249007 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
RFPL3-201ENST00000249007 KIF20BQ96Q89 1820 aa16.72■□□□□ 0.27
RFPL3-201ENST00000249007 PDE4DIPQ5VU43 2346 aa16.72■□□□□ 0.27
RFPL3-201ENST00000249007 VEGFBP49765 207 aa16.72■□□□□ 0.27
RFPL3-201ENST00000249007 WBP1LQ9NX94 342 aa16.72■□□□□ 0.27
RFPL3-201ENST00000249007 PTCD1O75127 700 aaKnown RBP16.71■□□□□ 0.27
RFPL3-201ENST00000249007 POTEIP0CG38 1075 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms