RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
NUP85-201ENST00000245544 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
NUP85-201ENST00000245544 STRN4Q9NRL3 753 aa17■□□□□ 0.31
NUP85-201ENST00000245544 SPG7Q9UQ90 795 aa17■□□□□ 0.31
NUP85-201ENST00000245544 PDE4AP27815 886 aa16.99■□□□□ 0.31
NUP85-201ENST00000245544 HDAC1Q13547 482 aaPredicted RBP16.99■□□□□ 0.31
NUP85-201ENST00000245544 STK31Q9BXU1 1019 aa16.99■□□□□ 0.31
NUP85-201ENST00000245544 OVOS2A0A0G2JMS6 1433 aa16.99■□□□□ 0.31
NUP85-201ENST00000245544 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
NUP85-201ENST00000245544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.311e-7■□□□□ 10.2
NUP85-201ENST00000245544 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
NUP85-201ENST00000245544 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
NUP85-201ENST00000245544 HDGFL1Q5TGJ6 251 aa16.98■□□□□ 0.31
NUP85-201ENST00000245544 IFNL2Q8IZJ0 200 aa16.97■□□□□ 0.31
NUP85-201ENST00000245544 SCN11AQ9UI33 1791 aa16.97■□□□□ 0.31
NUP85-201ENST00000245544 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
NUP85-201ENST00000245544 FLIIQ13045 1269 aa16.97■□□□□ 0.31
NUP85-201ENST00000245544 BACH2Q9BYV9 841 aa16.97■□□□□ 0.31
NUP85-201ENST00000245544 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
NUP85-201ENST00000245544 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
NUP85-201ENST00000245544 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.31
NUP85-201ENST00000245544 SLC39A6Q13433 755 aa16.96■□□□□ 0.3
NUP85-201ENST00000245544 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.3
NUP85-201ENST00000245544 SIRT2Q8IXJ6 389 aa16.96■□□□□ 0.3
NUP85-201ENST00000245544 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.3
NUP85-201ENST00000245544 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.3
NUP85-201ENST00000245544 EVA1CP58658 441 aa16.95■□□□□ 0.3
NUP85-201ENST00000245544 SLC52A2Q9HAB3 445 aa16.95■□□□□ 0.3
NUP85-201ENST00000245544 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
NUP85-201ENST00000245544 BTG4Q9NY30 223 aa16.94■□□□□ 0.3
NUP85-201ENST00000245544 CACNA1FO60840 1977 aa16.94■□□□□ 0.3
NUP85-201ENST00000245544 ANXA1P04083 346 aa16.94■□□□□ 0.3
NUP85-201ENST00000245544 FKBP5Q13451 457 aaPredicted RBP16.94■□□□□ 0.3
NUP85-201ENST00000245544 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
NUP85-201ENST00000245544 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
NUP85-201ENST00000245544 GIGYF1O75420 1035 aaPredicted RBP16.93■□□□□ 0.3
NUP85-201ENST00000245544 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
NUP85-201ENST00000245544 MEIS3Q99687 375 aa16.93■□□□□ 0.3
NUP85-201ENST00000245544 USP35Q9P2H5 1018 aa16.93■□□□□ 0.3
NUP85-201ENST00000245544 HOXB7P09629 217 aa16.93■□□□□ 0.3
NUP85-201ENST00000245544 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
NUP85-201ENST00000245544 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
NUP85-201ENST00000245544 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
NUP85-201ENST00000245544 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
NUP85-201ENST00000245544 ZNF790Q6PG37 636 aa16.91■□□□□ 0.3
NUP85-201ENST00000245544 ZCRB1Q8TBF4 217 aaKnown RBP16.91■□□□□ 0.3
NUP85-201ENST00000245544 PLEKHG2Q9H7P9 1386 aa16.91■□□□□ 0.3
NUP85-201ENST00000245544 IL2RBP14784 551 aa16.91■□□□□ 0.3
NUP85-201ENST00000245544 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
NUP85-201ENST00000245544 COL22A1Q8NFW1 1626 aaPredicted RBP16.9■□□□□ 0.3
NUP85-201ENST00000245544 PROSER3Q2NL68 480 aa16.9■□□□□ 0.3
NUP85-201ENST00000245544 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
NUP85-201ENST00000245544 CCT4P50991 539 aaKnown RBP16.89■□□□□ 0.29
NUP85-201ENST00000245544 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
NUP85-201ENST00000245544 PHLPP1O60346 1717 aa16.89■□□□□ 0.29
NUP85-201ENST00000245544 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
NUP85-201ENST00000245544 MRC1P22897 1456 aa16.89■□□□□ 0.29
NUP85-201ENST00000245544 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
NUP85-201ENST00000245544 PCDH11XQ9BZA7 1347 aa16.88■□□□□ 0.29
NUP85-201ENST00000245544 PCDH11YQ9BZA8 1340 aa16.88■□□□□ 0.29
NUP85-201ENST00000245544 FAM161AQ3B820 660 aa16.88■□□□□ 0.29
NUP85-201ENST00000245544 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
NUP85-201ENST00000245544 HSP90AB1P08238 724 aaKnown RBP16.87■□□□□ 0.29
NUP85-201ENST00000245544 CABP4P57796 275 aa16.87■□□□□ 0.29
NUP85-201ENST00000245544 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
NUP85-201ENST00000245544 C5P01031 1676 aa16.87■□□□□ 0.29
NUP85-201ENST00000245544 NUCB1Q02818 461 aa16.87■□□□□ 0.29
NUP85-201ENST00000245544 ADAMTS2O95450 1211 aa16.86■□□□□ 0.29
NUP85-201ENST00000245544 CEP85Q6P2H3 762 aa16.86■□□□□ 0.29
NUP85-201ENST00000245544 DBF4Q9UBU7 674 aaPredicted RBP16.86■□□□□ 0.29
NUP85-201ENST00000245544 ANKRD44Q8N8A2 993 aa16.85■□□□□ 0.29
NUP85-201ENST00000245544 LNPKQ9C0E8 428 aa16.85■□□□□ 0.29
NUP85-201ENST00000245544 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
NUP85-201ENST00000245544 TOM1O60784 492 aa16.85■□□□□ 0.29
NUP85-201ENST00000245544 PDIA6Q15084 440 aa16.85■□□□□ 0.29
NUP85-201ENST00000245544 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
NUP85-201ENST00000245544 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
NUP85-201ENST00000245544 ANKRD45Q5TZF3 282 aa16.84■□□□□ 0.29
NUP85-201ENST00000245544 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
NUP85-201ENST00000245544 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
NUP85-201ENST00000245544 GCC1Q96CN9 775 aa16.84■□□□□ 0.29
NUP85-201ENST00000245544 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
NUP85-201ENST00000245544 ADCY9O60503 1353 aa16.83■□□□□ 0.28
NUP85-201ENST00000245544 N4BP2Q86UW6 1770 aaPredicted RBP16.83■□□□□ 0.28
NUP85-201ENST00000245544 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
NUP85-201ENST00000245544 NUTM2BA6NNL0 878 aaPredicted RBP16.82■□□□□ 0.28
NUP85-201ENST00000245544 NUTM2EB1AL46 878 aaPredicted RBP16.82■□□□□ 0.28
NUP85-201ENST00000245544 NUTM2AQ8IVF1 878 aaPredicted RBP16.82■□□□□ 0.28
NUP85-201ENST00000245544 RPAP2Q8IXW5 612 aaPredicted RBP16.82■□□□□ 0.28
NUP85-201ENST00000245544 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
NUP85-201ENST00000245544 USP44Q9H0E7 712 aa16.82■□□□□ 0.28
NUP85-201ENST00000245544 PXDNLA1KZ92 1463 aa16.82■□□□□ 0.28
NUP85-201ENST00000245544 MSH5O43196 834 aa16.82■□□□□ 0.28
NUP85-201ENST00000245544 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
NUP85-201ENST00000245544 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
NUP85-201ENST00000245544 PIP4K2AP48426 406 aaPredicted RBP16.81■□□□□ 0.28
NUP85-201ENST00000245544 DCTPP1Q9H773 170 aa16.81■□□□□ 0.28
NUP85-201ENST00000245544 GLI3P10071 1580 aa16.81■□□□□ 0.28
NUP85-201ENST00000245544 ERVV-2B6SEH9 535 aa16.81■□□□□ 0.28
NUP85-201ENST00000245544 GNAI2P04899 355 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms