RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 F6X3S4 739 aa11.08□□□□□ -0.64
SRSF6-201ENST00000244020 RRS1Q15050 365 aaKnown RBP11.08□□□□□ -0.64
SRSF6-201ENST00000244020 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
SRSF6-201ENST00000244020 U2AF2P26368 475 aaKnown RBP eCLIP11.08□□□□□ -0.642e-25■■□□□ 12.2
SRSF6-201ENST00000244020 UBE2HP62256 183 aa11.08□□□□□ -0.64
SRSF6-201ENST00000244020 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
SRSF6-201ENST00000244020 ZNF710Q8N1W2 664 aa11.08□□□□□ -0.64
SRSF6-201ENST00000244020 RIOK3O14730 519 aaKnown RBP11.07□□□□□ -0.64
SRSF6-201ENST00000244020 GNAI2P04899 355 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 MCM10Q7L590 875 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 COG3Q96JB2 828 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 MSH6P52701 1360 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 ARHGAP31Q2M1Z3 1444 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 VPS37CA5D8V6 355 aaPredicted RBP11.07□□□□□ -0.64
SRSF6-201ENST00000244020 FKBP5Q13451 457 aaPredicted RBP11.07□□□□□ -0.64
SRSF6-201ENST00000244020 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.07□□□□□ -0.64
SRSF6-201ENST00000244020 SOX12O15370 315 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 ANAPC15P60006 121 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 CUL4AQ13619 759 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 TEX35Q5T0J7 233 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 STK31Q9BXU1 1019 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
SRSF6-201ENST00000244020 KIF20AO95235 890 aa11.06□□□□□ -0.64
SRSF6-201ENST00000244020 MAP4K4O95819 1239 aaPredicted RBP11.06□□□□□ -0.64
SRSF6-201ENST00000244020 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
SRSF6-201ENST00000244020 CCDC192P0DO97 292 aa11.06□□□□□ -0.64
SRSF6-201ENST00000244020 STX6O43752 255 aa11.06□□□□□ -0.64
SRSF6-201ENST00000244020 RTF1Q92541 710 aaKnown RBP11.06□□□□□ -0.64
SRSF6-201ENST00000244020 ZSCAN22P10073 491 aaPredicted RBP11.05□□□□□ -0.64
SRSF6-201ENST00000244020 CHMLP26374 656 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 SULT6B1Q6IMI4 303 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 MYO3AQ8NEV4 1616 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 NME9Q86XW9 330 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 PTPRCP08575 1304 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 FAM135BQ49AJ0 1406 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.05□□□□□ -0.64
SRSF6-201ENST00000244020 IDI1Q13907 227 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 IL1RAPL2Q9NP60 686 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 ZFYVE9O95405 1425 aa11.05□□□□□ -0.64
SRSF6-201ENST00000244020 CCT4P50991 539 aaKnown RBP11.05□□□□□ -0.64
SRSF6-201ENST00000244020 C16orf45Q96MC5 204 aaPredicted RBP11.05□□□□□ -0.64
SRSF6-201ENST00000244020 IL13P35225 146 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 GPS2Q13227 327 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 GTF2F1P35269 517 aaKnown RBP eCLIP11.04□□□□□ -0.641e-11■■■■■ 120.3
SRSF6-201ENST00000244020 PYCARDQ9ULZ3 195 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 USP32Q8NFA0 1604 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 REREQ9P2R6 1566 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 PNPLA6Q8IY17 1366 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 DTNBO60941 627 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 CAMK4Q16566 473 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 TRIM5Q9C035 493 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 LRRC7Q96NW7 1537 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 COL3A1P02461 1466 aaPredicted RBP11.04□□□□□ -0.64
SRSF6-201ENST00000244020 NPATQ14207 1427 aa11.04□□□□□ -0.64
SRSF6-201ENST00000244020 EFCAB6Q5THR3 1501 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 VGLL3A8MV65 326 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 SYT1P21579 422 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 TSPYL4Q9UJ04 414 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
SRSF6-201ENST00000244020 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 DHX37Q8IY37 1157 aaKnown RBP11.03□□□□□ -0.64
SRSF6-201ENST00000244020 KIAA1524Q8TCG1 905 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 SPTLC3Q9NUV7 552 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 PTGS1P23219 599 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 TPD52L1Q16890 204 aaPredicted RBP11.03□□□□□ -0.64
SRSF6-201ENST00000244020 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 OSBPL3Q9H4L5 887 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 LIMCH1Q9UPQ0 1083 aa11.03□□□□□ -0.64
SRSF6-201ENST00000244020 ADGRB1O14514 1584 aa11.02□□□□□ -0.64
SRSF6-201ENST00000244020 GNAI3P08754 354 aa11.02□□□□□ -0.64
SRSF6-201ENST00000244020 TNNT1P13805 278 aa11.02□□□□□ -0.64
SRSF6-201ENST00000244020 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.64
SRSF6-201ENST00000244020 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.64
SRSF6-201ENST00000244020 CCDC112Q8NEF3 446 aa11.02□□□□□ -0.64
SRSF6-201ENST00000244020 MROH2AA6NES4 1674 aa11.02□□□□□ -0.65
SRSF6-201ENST00000244020 F13A1P00488 732 aa11.02□□□□□ -0.65
SRSF6-201ENST00000244020 OS9Q13438 667 aaPredicted RBP11.02□□□□□ -0.65
SRSF6-201ENST00000244020 CCDC83Q8IWF9 413 aa11.02□□□□□ -0.65
SRSF6-201ENST00000244020 CCDC186Q7Z3E2 898 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 NEURL4Q96JN8 1562 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 ADGRB3O60242 1522 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 GLI2P10070 1586 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 CASTP20810 708 aaKnown RBP11.01□□□□□ -0.65
SRSF6-201ENST00000244020 CWC27Q6UX04 472 aaKnown RBP11.01□□□□□ -0.65
SRSF6-201ENST00000244020 FEZ1Q99689 392 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 DEPDC5O75140 1603 aa11.01□□□□□ -0.65
SRSF6-201ENST00000244020 SURF6O75683 361 aaKnown RBP11□□□□□ -0.65
SRSF6-201ENST00000244020 AK2P54819 239 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 MAP3K11Q16584 847 aa11□□□□□ -0.65
SRSF6-201ENST00000244020 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
SRSF6-201ENST00000244020 G2E3Q7L622 706 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms