RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ATP10DQ9P241 1426 aa23.22■■□□□ 1.31
HOXC11-201ENST00000243082 MEIS3Q99687 375 aa23.21■■□□□ 1.31
HOXC11-201ENST00000243082 KDM3BQ7LBC6 1761 aa23.21■■□□□ 1.31
HOXC11-201ENST00000243082 TEFQ10587 303 aa23.21■■□□□ 1.31
HOXC11-201ENST00000243082 ANKRD45Q5TZF3 282 aa23.21■■□□□ 1.31
HOXC11-201ENST00000243082 CCT4P50991 539 aaKnown RBP23.2■■□□□ 1.3
HOXC11-201ENST00000243082 ANKRD44Q8N8A2 993 aa23.2■■□□□ 1.3
HOXC11-201ENST00000243082 CRYBG1Q9Y4K1 1723 aa23.2■■□□□ 1.3
HOXC11-201ENST00000243082 OVOS2A0A0G2JMS6 1433 aa23.2■■□□□ 1.3
HOXC11-201ENST00000243082 KCNQ3O43525 872 aa23.2■■□□□ 1.3
HOXC11-201ENST00000243082 CACNA1FO60840 1977 aa23.19■■□□□ 1.3
HOXC11-201ENST00000243082 HDGFL1Q5TGJ6 251 aa23.19■■□□□ 1.3
HOXC11-201ENST00000243082 SLC4A10Q6U841 1118 aa23.19■■□□□ 1.3
HOXC11-201ENST00000243082 RPAP2Q8IXW5 612 aaPredicted RBP23.19■■□□□ 1.3
HOXC11-201ENST00000243082 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
HOXC11-201ENST00000243082 CEP85Q6P2H3 762 aa23.18■■□□□ 1.3
HOXC11-201ENST00000243082 DCTPP1Q9H773 170 aa23.18■■□□□ 1.3
HOXC11-201ENST00000243082 NLRP2Q9NX02 1062 aa23.18■■□□□ 1.3
HOXC11-201ENST00000243082 HOXB7P09629 217 aa23.18■■□□□ 1.3
HOXC11-201ENST00000243082 FKBP5Q13451 457 aaPredicted RBP23.18■■□□□ 1.3
HOXC11-201ENST00000243082 CHRNA2Q15822 529 aa23.17■■□□□ 1.3
HOXC11-201ENST00000243082 SLAIN2Q9P270 581 aa23.17■■□□□ 1.3
HOXC11-201ENST00000243082 CPDO75976 1380 aa23.17■■□□□ 1.3
HOXC11-201ENST00000243082 ABCC6O95255 1503 aa23.16■■□□□ 1.3
HOXC11-201ENST00000243082 RAPGEF4Q8WZA2 1011 aa23.15■■□□□ 1.3
HOXC11-201ENST00000243082 ADAMTS7Q9UKP4 1686 aa23.14■■□□□ 1.3
HOXC11-201ENST00000243082 SOS2Q07890 1332 aaPredicted RBP23.14■■□□□ 1.29
HOXC11-201ENST00000243082 PHAXQ9H814 394 aaKnown RBP23.13■■□□□ 1.29
HOXC11-201ENST00000243082 EIF2S2P20042 333 aaKnown RBP23.13■■□□□ 1.29
HOXC11-201ENST00000243082 CSB-PGBD3P0DP91 1061 aa23.12■■□□□ 1.29
HOXC11-201ENST00000243082 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
HOXC11-201ENST00000243082 MEGF6O75095 1541 aa23.11■■□□□ 1.29
HOXC11-201ENST00000243082 HEG1Q9ULI3 1381 aa23.11■■□□□ 1.29
HOXC11-201ENST00000243082 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
HOXC11-201ENST00000243082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
HOXC11-201ENST00000243082 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
HOXC11-201ENST00000243082 PXDNLA1KZ92 1463 aa23.1■■□□□ 1.29
HOXC11-201ENST00000243082 BMP2KLQ5H9B9 411 aa23.09■■□□□ 1.29
HOXC11-201ENST00000243082 CHPF2Q9P2E5 772 aa23.09■■□□□ 1.29
HOXC11-201ENST00000243082 TBC1D32Q96NH3 1257 aa23.09■■□□□ 1.29
HOXC11-201ENST00000243082 SPG7Q9UQ90 795 aa23.09■■□□□ 1.29
HOXC11-201ENST00000243082 GNAI2P04899 355 aa23.08■■□□□ 1.29
HOXC11-201ENST00000243082 PHKG2P15735 406 aa23.08■■□□□ 1.29
HOXC11-201ENST00000243082 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
HOXC11-201ENST00000243082 N4BP2Q86UW6 1770 aaPredicted RBP23.08■■□□□ 1.29
HOXC11-201ENST00000243082 PLEKHG2Q9H7P9 1386 aa23.08■■□□□ 1.29
HOXC11-201ENST00000243082 GIGYF1O75420 1035 aaPredicted RBP23.08■■□□□ 1.28
HOXC11-201ENST00000243082 GNAI3P08754 354 aa23.07■■□□□ 1.28
HOXC11-201ENST00000243082 SLC4A3P48751 1232 aa23.07■■□□□ 1.28
HOXC11-201ENST00000243082 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
HOXC11-201ENST00000243082 HMMRO75330 724 aa23.05■■□□□ 1.28
HOXC11-201ENST00000243082 PLEKHM2Q8IWE5 1019 aa23.04■■□□□ 1.28
HOXC11-201ENST00000243082 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
HOXC11-201ENST00000243082 USP44Q9H0E7 712 aa23.04■■□□□ 1.28
HOXC11-201ENST00000243082 SLC52A2Q9HAB3 445 aa23.04■■□□□ 1.28
HOXC11-201ENST00000243082 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
HOXC11-201ENST00000243082 ANXA1P04083 346 aa23.03■■□□□ 1.28
HOXC11-201ENST00000243082 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
HOXC11-201ENST00000243082 DBF4Q9UBU7 674 aaPredicted RBP23.03■■□□□ 1.28
HOXC11-201ENST00000243082 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
HOXC11-201ENST00000243082 CYP27B1O15528 508 aa23.03■■□□□ 1.28
HOXC11-201ENST00000243082 C16orf71Q8IYS4 520 aaPredicted RBP23.03■■□□□ 1.28
HOXC11-201ENST00000243082 MFAP1P55081 439 aaKnown RBP23.01■■□□□ 1.27
HOXC11-201ENST00000243082 PKD1L3Q7Z443 1732 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 DAXXQ9UER7 740 aaPredicted RBP23.01■■□□□ 1.27
HOXC11-201ENST00000243082 PI4KAP2A4QPH2 592 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 ATP8B2P98198 1209 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 ZNF790Q6PG37 636 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 PI4KAP1Q8N8J0 262 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 SRCIN1Q9C0H9 1055 aa23.01■■□□□ 1.27
HOXC11-201ENST00000243082 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
HOXC11-201ENST00000243082 BEND3Q5T5X7 828 aa23■■□□□ 1.27
HOXC11-201ENST00000243082 DNAAF4Q8WXU2 420 aa23■■□□□ 1.27
HOXC11-201ENST00000243082 ADCY9O60503 1353 aa23■■□□□ 1.27
HOXC11-201ENST00000243082 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
HOXC11-201ENST00000243082 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
HOXC11-201ENST00000243082 PROSER3Q2NL68 480 aa22.99■■□□□ 1.27
HOXC11-201ENST00000243082 DCAF5Q96JK2 942 aa22.99■■□□□ 1.27
HOXC11-201ENST00000243082 LRRFIP2Q9Y608 721 aaKnown RBP22.99■■□□□ 1.27
HOXC11-201ENST00000243082 C22orf23Q9BZE7 217 aa22.99■■□□□ 1.27
HOXC11-201ENST00000243082 PNMA6EA0A0J9YXQ4 647 aa22.98■■□□□ 1.27
HOXC11-201ENST00000243082 GSPT1P15170 499 aaKnown RBP22.98■■□□□ 1.27
HOXC11-201ENST00000243082 OTUD7AQ8TE49 926 aaPredicted RBP22.98■■□□□ 1.27
HOXC11-201ENST00000243082 APBB1O00213 710 aa22.98■■□□□ 1.27
HOXC11-201ENST00000243082 UBTFL1P0CB47 393 aaPredicted RBP22.98■■□□□ 1.27
HOXC11-201ENST00000243082 MRC1P22897 1456 aa22.97■■□□□ 1.27
HOXC11-201ENST00000243082 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
HOXC11-201ENST00000243082 ABCA3Q99758 1704 aa22.97■■□□□ 1.27
HOXC11-201ENST00000243082 COL5A2P05997 1499 aaPredicted RBP22.97■■□□□ 1.27
HOXC11-201ENST00000243082 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
HOXC11-201ENST00000243082 TTC22Q5TAA0 569 aa22.96■■□□□ 1.27
HOXC11-201ENST00000243082 TOM1L2Q6ZVM7 507 aa22.96■■□□□ 1.27
HOXC11-201ENST00000243082 HYPKQ9NX55 129 aa22.95■■□□□ 1.26
HOXC11-201ENST00000243082 PDIA6Q15084 440 aa22.94■■□□□ 1.26
HOXC11-201ENST00000243082 TBC1D9Q6ZT07 1266 aa22.94■■□□□ 1.26
HOXC11-201ENST00000243082 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
HOXC11-201ENST00000243082 EXOC6BQ9Y2D4 811 aa22.94■■□□□ 1.26
HOXC11-201ENST00000243082 DDX21Q9NR30 783 aaKnown RBP eCLIP22.94■■□□□ 1.26
HOXC11-201ENST00000243082 NBR1Q14596 966 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms