RNA–Protein interactions for RNA: ENST00000233612.8

GCA-201, Transcript of grancalcin, humanhuman

TSL 2 BASIC

Gene GCA, Length 1,694 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-201ENST00000233612 MEGF6O75095 1541 aa27.99■■■□□ 2.07
GCA-201ENST00000233612 PKD1L3Q7Z443 1732 aa27.98■■■□□ 2.07
GCA-201ENST00000233612 BTBD11A6QL63 1104 aa27.98■■■□□ 2.07
GCA-201ENST00000233612 PRDM11Q9NQV5 511 aa27.98■■■□□ 2.07
GCA-201ENST00000233612 LTBP4Q8N2S1 1624 aa27.98■■■□□ 2.07
GCA-201ENST00000233612 WDR17Q8IZU2 1322 aa27.98■■■□□ 2.07
GCA-201ENST00000233612 SCN11AQ9UI33 1791 aa27.97■■■□□ 2.07
GCA-201ENST00000233612 HEG1Q9ULI3 1381 aa27.97■■■□□ 2.07
GCA-201ENST00000233612 RGS3P49796 1198 aa27.97■■■□□ 2.07
GCA-201ENST00000233612 G2E3Q7L622 706 aa27.97■■■□□ 2.07
GCA-201ENST00000233612 PHKG2P15735 406 aa27.96■■■□□ 2.07
GCA-201ENST00000233612 FAM161AQ3B820 660 aa27.95■■■□□ 2.07
GCA-201ENST00000233612 IFNL2Q8IZJ0 200 aa27.95■■■□□ 2.07
GCA-201ENST00000233612 COL5A2P05997 1499 aaPredicted RBP27.94■■■□□ 2.06
GCA-201ENST00000233612 CCT4P50991 539 aaKnown RBP27.94■■■□□ 2.06
GCA-201ENST00000233612 FLIIQ13045 1269 aa27.93■■■□□ 2.06
GCA-201ENST00000233612 AHDC1Q5TGY3 1603 aaPredicted RBP27.92■■■□□ 2.06
GCA-201ENST00000233612 HDGFL1Q5TGJ6 251 aa27.92■■■□□ 2.06
GCA-201ENST00000233612 GCC1Q96CN9 775 aa27.91■■■□□ 2.06
GCA-201ENST00000233612 KDM6AO15550 1401 aaPredicted RBP27.91■■■□□ 2.06
GCA-201ENST00000233612 KCNQ3O43525 872 aa27.91■■■□□ 2.06
GCA-201ENST00000233612 HSP90AB1P08238 724 aaKnown RBP27.91■■■□□ 2.06
GCA-201ENST00000233612 C8orf34Q49A92 452 aa27.9■■■□□ 2.06
GCA-201ENST00000233612 CARD10Q9BWT7 1032 aa27.9■■■□□ 2.06
GCA-201ENST00000233612 N4BP2Q86UW6 1770 aaPredicted RBP27.89■■■□□ 2.06
GCA-201ENST00000233612 SIRT2Q8IXJ6 389 aa27.89■■■□□ 2.06
GCA-201ENST00000233612 DCAF5Q96JK2 942 aa27.89■■■□□ 2.06
GCA-201ENST00000233612 PARP4Q9UKK3 1724 aaKnown RBP27.89■■■□□ 2.06
GCA-201ENST00000233612 ROBO1Q9Y6N7 1651 aa27.89■■■□□ 2.05
GCA-201ENST00000233612 PXDNLA1KZ92 1463 aa27.89■■■□□ 2.05
GCA-201ENST00000233612 MRC1P22897 1456 aa27.89■■■□□ 2.05
GCA-201ENST00000233612 RPAP2Q8IXW5 612 aaPredicted RBP27.88■■■□□ 2.05
GCA-201ENST00000233612 SLC52A2Q9HAB3 445 aa27.88■■■□□ 2.05
GCA-201ENST00000233612 CYP27B1O15528 508 aa27.87■■■□□ 2.05
GCA-201ENST00000233612 NUCB1Q02818 461 aa27.87■■■□□ 2.05
GCA-201ENST00000233612 GIGYF1O75420 1035 aaPredicted RBP27.87■■■□□ 2.05
GCA-201ENST00000233612 COL22A1Q8NFW1 1626 aaPredicted RBP27.86■■■□□ 2.05
GCA-201ENST00000233612 TOM1L2Q6ZVM7 507 aa27.85■■■□□ 2.05
GCA-201ENST00000233612 FKBP5Q13451 457 aaPredicted RBP27.84■■■□□ 2.05
GCA-201ENST00000233612 ANKRD44Q8N8A2 993 aa27.84■■■□□ 2.05
GCA-201ENST00000233612 C1orf115Q9H7X2 142 aa27.84■■■□□ 2.05
GCA-201ENST00000233612 ATP10DQ9P241 1426 aa27.84■■■□□ 2.05
GCA-201ENST00000233612 F6X3S4 739 aa27.83■■■□□ 2.05
GCA-201ENST00000233612 NECTIN2Q92692 538 aa27.82■■■□□ 2.04
GCA-201ENST00000233612 ZNF790Q6PG37 636 aa27.81■■■□□ 2.04
GCA-201ENST00000233612 DBF4Q9UBU7 674 aaPredicted RBP27.81■■■□□ 2.04
GCA-201ENST00000233612 MEIS3Q99687 375 aa27.81■■■□□ 2.04
GCA-201ENST00000233612 DCTPP1Q9H773 170 aa27.81■■■□□ 2.04
GCA-201ENST00000233612 EIF2S2P20042 333 aaKnown RBP27.8■■■□□ 2.04
GCA-201ENST00000233612 NKX1-1Q15270 411 aaPredicted RBP27.8■■■□□ 2.04
GCA-201ENST00000233612 SLC4A10Q6U841 1118 aa27.8■■■□□ 2.04
GCA-201ENST00000233612 CHD1LQ86WJ1 897 aa27.8■■■□□ 2.04
GCA-201ENST00000233612 NFATC2IPQ8NCF5 419 aa27.8■■■□□ 2.04
GCA-201ENST00000233612 ZCRB1Q8TBF4 217 aaKnown RBP27.8■■■□□ 2.04
GCA-201ENST00000233612 IL2RBP14784 551 aa27.79■■■□□ 2.04
GCA-201ENST00000233612 ANP32AP39687 249 aaKnown RBP27.79■■■□□ 2.04
GCA-201ENST00000233612 CEP85Q6P2H3 762 aa27.79■■■□□ 2.04
GCA-201ENST00000233612 PHAXQ9H814 394 aaKnown RBP27.79■■■□□ 2.04
GCA-201ENST00000233612 PCDH11XQ9BZA7 1347 aa27.79■■■□□ 2.04
GCA-201ENST00000233612 PCDH11YQ9BZA8 1340 aa27.79■■■□□ 2.04
GCA-201ENST00000233612 CHPF2Q9P2E5 772 aa27.78■■■□□ 2.04
GCA-201ENST00000233612 COL14A1Q05707 1796 aaKnown RBP27.78■■■□□ 2.04
GCA-201ENST00000233612 EVA1CP58658 441 aa27.78■■■□□ 2.04
GCA-201ENST00000233612 GNAI3P08754 354 aa27.77■■■□□ 2.04
GCA-201ENST00000233612 LARP1Q6PKG0 1096 aaKnown RBP27.77■■■□□ 2.04
GCA-201ENST00000233612 ERVV-2B6SEH9 535 aa27.74■■■□□ 2.03
GCA-201ENST00000233612 GNAI2P04899 355 aa27.74■■■□□ 2.03
GCA-201ENST00000233612 HYPKQ9NX55 129 aa27.73■■■□□ 2.03
GCA-201ENST00000233612 DDX21Q9NR30 783 aaKnown RBP eCLIP27.72■■■□□ 2.03
GCA-201ENST00000233612 SHANK3Q9BYB0 1731 aa27.72■■■□□ 2.03
GCA-201ENST00000233612 CABP4P57796 275 aa27.72■■■□□ 2.03
GCA-201ENST00000233612 ANKRD45Q5TZF3 282 aa27.72■■■□□ 2.03
GCA-201ENST00000233612 STRN4Q9NRL3 753 aa27.72■■■□□ 2.03
GCA-201ENST00000233612 HMMRO75330 724 aa27.71■■■□□ 2.03
GCA-201ENST00000233612 DNAAF4Q8WXU2 420 aa27.71■■■□□ 2.03
GCA-201ENST00000233612 IPO9Q96P70 1041 aaKnown RBP27.71■■■□□ 2.03
GCA-201ENST00000233612 MSH5O43196 834 aa27.7■■■□□ 2.02
GCA-201ENST00000233612 SLC39A6Q13433 755 aa27.7■■■□□ 2.02
GCA-201ENST00000233612 LNPKQ9C0E8 428 aa27.7■■■□□ 2.02
GCA-201ENST00000233612 USP44Q9H0E7 712 aa27.7■■■□□ 2.02
GCA-201ENST00000233612 BTG4Q9NY30 223 aa27.7■■■□□ 2.02
GCA-201ENST00000233612 SRCIN1Q9C0H9 1055 aa27.69■■■□□ 2.02
GCA-201ENST00000233612 COL16A1Q07092 1604 aaPredicted RBP27.69■■■□□ 2.02
GCA-201ENST00000233612 PDIA6Q15084 440 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 BEND3Q5T5X7 828 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 ZNF496Q96IT1 587 aaPredicted RBP27.68■■■□□ 2.02
GCA-201ENST00000233612 PRAMEF22A3QJZ6 481 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 PI4KAP2A4QPH2 592 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 SNRPA1P09661 255 aaKnown RBP27.68■■■□□ 2.02
GCA-201ENST00000233612 TTC5Q8N0Z6 440 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 PI4KAP1Q8N8J0 262 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 FMNL2Q96PY5 1086 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 ADCY9O60503 1353 aa27.68■■■□□ 2.02
GCA-201ENST00000233612 C5P01031 1676 aa27.67■■■□□ 2.02
GCA-201ENST00000233612 KSR2Q6VAB6 950 aa27.67■■■□□ 2.02
GCA-201ENST00000233612 IBTKQ9P2D0 1353 aaPredicted RBP27.67■■■□□ 2.02
GCA-201ENST00000233612 ATP8B2P98198 1209 aa27.66■■■□□ 2.02
GCA-201ENST00000233612 PHLPP1O60346 1717 aa27.66■■■□□ 2.02
GCA-201ENST00000233612 TOM1O60784 492 aa27.65■■■□□ 2.02
GCA-201ENST00000233612 PROSER3Q2NL68 480 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms