RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDH12-201ENST00000231484 LIG1P18858 919 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 PPM1EQ8WY54 764 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 TMCO5BA8MYB1 307 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 SKILP12757 684 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 CASTP20810 708 aaKnown RBP13.6□□□□□ -0.23
PCDH12-201ENST00000231484 ZNF165P49910 485 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 NEUROD6Q96NK8 337 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 SCLT1Q96NL6 688 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 HMOX1P09601 288 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 U2AF2P26368 475 aaKnown RBP eCLIP13.6□□□□□ -0.23
PCDH12-201ENST00000231484 CCDC186Q7Z3E2 898 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 FERMT3Q86UX7 667 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 WIZO95785 1651 aa13.6□□□□□ -0.23
PCDH12-201ENST00000231484 TSR2Q969E8 191 aaKnown RBP13.59□□□□□ -0.23
PCDH12-201ENST00000231484 CCDC43Q96MW1 224 aaKnown RBP13.59□□□□□ -0.23
PCDH12-201ENST00000231484 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 OPA1O60313 960 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 TWISTNBQ3B726 338 aaPredicted RBP13.59□□□□□ -0.23
PCDH12-201ENST00000231484 MTMR7Q9Y216 660 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 SETSIPP0DME0 302 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 GTF3C6Q969F1 213 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 GOLGA1Q92805 767 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 GDPD2Q9HCC8 539 aa13.59□□□□□ -0.23
PCDH12-201ENST00000231484 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
PCDH12-201ENST00000231484 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.23
PCDH12-201ENST00000231484 HYPKQ9NX55 129 aa13.58□□□□□ -0.23
PCDH12-201ENST00000231484 SCAPERQ9BY12 1400 aa13.58□□□□□ -0.23
PCDH12-201ENST00000231484 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.24
PCDH12-201ENST00000231484 DNAI1Q9UI46 699 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 GOPCQ9HD26 462 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 USO1O60763 962 aaKnown RBP13.58□□□□□ -0.24
PCDH12-201ENST00000231484 KIF5BP33176 963 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 MAP4K4O95819 1239 aaPredicted RBP13.58□□□□□ -0.24
PCDH12-201ENST00000231484 KRT32Q14532 448 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
PCDH12-201ENST00000231484 MAP2K2P36507 400 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 DMTNQ08495 405 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CTAGE15A4D2H0 777 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CTAGE8P0CG41 777 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 C6orf163Q5TEZ5 329 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CTAGE6Q86UF2 777 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CTAGE4Q8IX94 777 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
PCDH12-201ENST00000231484 YEATS4O95619 227 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CKAP4Q07065 602 aaKnown RBP13.57□□□□□ -0.24
PCDH12-201ENST00000231484 TRIM22Q8IYM9 498 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 NSRP1Q9H0G5 558 aaKnown RBP13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CEP83Q9Y592 693 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CDKL5O76039 1030 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CCDC178Q5BJE1 867 aa13.57□□□□□ -0.24
PCDH12-201ENST00000231484 CLNS1AP54105 237 aaKnown RBP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 AIMP1Q12904 312 aaKnown RBP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 CCDC6Q16204 474 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 UTP14CQ5TAP6 766 aaKnown RBP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 MTHFSP49914 203 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 CCT4P50991 539 aaKnown RBP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 CCDC114Q96M63 670 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 TUBB4BP68371 445 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 HLTFQ14527 1009 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 NBPF8Q3BBV2 869 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 POTEDQ86YR6 584 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
PCDH12-201ENST00000231484 NUP88Q99567 741 aaPredicted RBP13.56□□□□□ -0.24
PCDH12-201ENST00000231484 MX1P20591 662 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 ALS2CR12Q96Q35 445 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 SEPT6Q14141 434 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 CCDC30Q5VVM6 783 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 CWC27Q6UX04 472 aaKnown RBP13.55□□□□□ -0.24
PCDH12-201ENST00000231484 ANKS4BQ8N8V4 417 aa13.55□□□□□ -0.24
PCDH12-201ENST00000231484 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
PCDH12-201ENST00000231484 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 KRT18P05783 430 aaKnown RBP13.54□□□□□ -0.24
PCDH12-201ENST00000231484 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 STX6O43752 255 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 LRCH2Q5VUJ6 765 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
PCDH12-201ENST00000231484 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
PCDH12-201ENST00000231484 RPAP2Q8IXW5 612 aaPredicted RBP13.54□□□□□ -0.24
PCDH12-201ENST00000231484 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 FBF1Q8TES7 1133 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 RAB3GAP1Q15042 981 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 CPLX3Q8WVH0 158 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 SNX21Q969T3 373 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 C8orf34Q49A92 452 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 HDXQ7Z353 690 aa13.54□□□□□ -0.24
PCDH12-201ENST00000231484 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms