RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
TTC1-201ENST00000231238 CPSF1Q10570 1443 aaKnown RBP12.92□□□□□ -0.34
TTC1-201ENST00000231238 MTHFSP49914 203 aa12.92□□□□□ -0.34
TTC1-201ENST00000231238 HIC1Q14526 733 aa12.92□□□□□ -0.34
TTC1-201ENST00000231238 FAM161AQ3B820 660 aa12.92□□□□□ -0.34
TTC1-201ENST00000231238 GPIHBP1Q8IV16 184 aa12.92□□□□□ -0.34
TTC1-201ENST00000231238 ITSN1Q15811 1721 aa12.92□□□□□ -0.34
TTC1-201ENST00000231238 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
TTC1-201ENST00000231238 EYA1Q99502 592 aa12.91□□□□□ -0.34
TTC1-201ENST00000231238 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
TTC1-201ENST00000231238 SENP3-EIF4A1A0A087X0R7 540 aa12.91□□□□□ -0.34
TTC1-201ENST00000231238 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
TTC1-201ENST00000231238 NME9Q86XW9 330 aa12.91□□□□□ -0.34
TTC1-201ENST00000231238 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
TTC1-201ENST00000231238 ATF3P18847 181 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 BCAMP50895 628 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 PTPN5P54829 565 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 ADAMTS8Q9UP79 889 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 NUDCQ9Y266 331 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
TTC1-201ENST00000231238 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
TTC1-201ENST00000231238 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
TTC1-201ENST00000231238 NKTRP30414 1462 aaKnown RBP12.9□□□□□ -0.34
TTC1-201ENST00000231238 TTC21BQ7Z4L5 1316 aa12.89□□□□□ -0.35
TTC1-201ENST00000231238 NWD1Q149M9 1564 aa12.89□□□□□ -0.35
TTC1-201ENST00000231238 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
TTC1-201ENST00000231238 GNPATO15228 680 aa12.89□□□□□ -0.35
TTC1-201ENST00000231238 KIF20BQ96Q89 1820 aa12.89□□□□□ -0.35
TTC1-201ENST00000231238 SOWAHBA6NEL2 793 aa12.88□□□□□ -0.35
TTC1-201ENST00000231238 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
TTC1-201ENST00000231238 USP6P35125 1406 aa12.88□□□□□ -0.35
TTC1-201ENST00000231238 TOPAZ1Q8N9V7 1692 aa12.88□□□□□ -0.35
TTC1-201ENST00000231238 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
TTC1-201ENST00000231238 PSME1Q06323 249 aa12.87□□□□□ -0.35
TTC1-201ENST00000231238 GTF3C3Q9Y5Q9 886 aa12.87□□□□□ -0.35
TTC1-201ENST00000231238 NALCNQ8IZF0 1738 aa12.87□□□□□ -0.35
TTC1-201ENST00000231238 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
TTC1-201ENST00000231238 INSRP06213 1382 aa12.86□□□□□ -0.35
TTC1-201ENST00000231238 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
TTC1-201ENST00000231238 SAMD7Q7Z3H4 446 aa12.86□□□□□ -0.35
TTC1-201ENST00000231238 MON2Q7Z3U7 1717 aa12.86□□□□□ -0.35
TTC1-201ENST00000231238 ANKRD26Q9UPS8 1709 aa12.86□□□□□ -0.35
TTC1-201ENST00000231238 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
TTC1-201ENST00000231238 NEFLP07196 543 aa12.85□□□□□ -0.35
TTC1-201ENST00000231238 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
TTC1-201ENST00000231238 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.352e-8■□□□□ 9.6
TTC1-201ENST00000231238 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
TTC1-201ENST00000231238 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
TTC1-201ENST00000231238 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
TTC1-201ENST00000231238 MSH6P52701 1360 aa12.84□□□□□ -0.35
TTC1-201ENST00000231238 BLMP54132 1417 aaPredicted RBP12.84□□□□□ -0.35
TTC1-201ENST00000231238 DIAPH1O60610 1272 aaKnown RBP12.84□□□□□ -0.35
TTC1-201ENST00000231238 NEFMP07197 916 aa12.84□□□□□ -0.35
TTC1-201ENST00000231238 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
TTC1-201ENST00000231238 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
TTC1-201ENST00000231238 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
TTC1-201ENST00000231238 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
TTC1-201ENST00000231238 RGPD8O14715 1765 aaPredicted RBP12.82□□□□□ -0.36
TTC1-201ENST00000231238 NCOA3Q9Y6Q9 1424 aa12.82□□□□□ -0.36
TTC1-201ENST00000231238 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
TTC1-201ENST00000231238 POLKQ9UBT6 870 aa12.81□□□□□ -0.36
TTC1-201ENST00000231238 FOXO3O43524 673 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 FBLN1P23142 703 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
TTC1-201ENST00000231238 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 ORAI2Q96SN7 254 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 EMILIN1Q9Y6C2 1016 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 ZNF335Q9H4Z2 1342 aaPredicted RBP12.8□□□□□ -0.36
TTC1-201ENST00000231238 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 AATKQ6ZMQ8 1374 aa12.8□□□□□ -0.36
TTC1-201ENST00000231238 APAF1O14727 1248 aa12.79□□□□□ -0.36
TTC1-201ENST00000231238 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
TTC1-201ENST00000231238 DCCP43146 1447 aa12.79□□□□□ -0.36
TTC1-201ENST00000231238 NRKQ7Z2Y5 1582 aa12.79□□□□□ -0.36
TTC1-201ENST00000231238 AMPHP49418 695 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 NGEFQ8N5V2 710 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 SSH2Q76I76 1423 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 RCCD1A6NED2 376 aa12.78□□□□□ -0.36
TTC1-201ENST00000231238 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
TTC1-201ENST00000231238 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
TTC1-201ENST00000231238 OATP04181 439 aa12.77□□□□□ -0.37
TTC1-201ENST00000231238 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
TTC1-201ENST00000231238 KRT28Q7Z3Y7 464 aa12.77□□□□□ -0.37
TTC1-201ENST00000231238 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
TTC1-201ENST00000231238 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
TTC1-201ENST00000231238 USP31Q70CQ4 1352 aa12.76□□□□□ -0.37
TTC1-201ENST00000231238 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
TTC1-201ENST00000231238 DNAJB2P25686 324 aa12.76□□□□□ -0.37
TTC1-201ENST00000231238 CDK12Q9NYV4 1490 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms