RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 SYT1P21579 422 aa16.24■□□□□ 0.19
PCDHB5-201ENST00000231134 SYCP1Q15431 976 aa16.24■□□□□ 0.19
PCDHB5-201ENST00000231134 TNMDQ9H2S6 317 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 ITSN2Q9NZM3 1697 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 SLU7O95391 586 aaKnown RBP16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 CUL4AQ13619 759 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 EXOC6BQ9Y2D4 811 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 SKILP12757 684 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 CBX8Q9HC52 389 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 ATP6V1DQ9Y5K8 247 aa16.23■□□□□ 0.19
PCDHB5-201ENST00000231134 VAMP4O75379 141 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 CPA1P15085 419 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 DNAJC25Q9H1X3 360 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 EIF2AK4Q9P2K8 1649 aaKnown RBP16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 IQSEC2Q5JU85 1478 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 API5Q9BZZ5 524 aaKnown RBP16.22■□□□□ 0.19
PCDHB5-201ENST00000231134 CCDC83Q8IWF9 413 aa16.21■□□□□ 0.19
PCDHB5-201ENST00000231134 ZNF446Q9NWS9 450 aa16.21■□□□□ 0.19
PCDHB5-201ENST00000231134 F13A1P00488 732 aa16.21■□□□□ 0.19
PCDHB5-201ENST00000231134 ZNF75DP51815 510 aa16.21■□□□□ 0.19
PCDHB5-201ENST00000231134 CCDC34Q96HJ3 373 aa16.21■□□□□ 0.19
PCDHB5-201ENST00000231134 ST5P78524 1137 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 SKIDA1Q1XH10 827 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 ESYT1Q9BSJ8 1104 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 ZNF165P49910 485 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 LCMT1Q9UIC8 334 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 LIG1P18858 919 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 DRC1Q96MC2 740 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 DACT1Q9NYF0 836 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
PCDHB5-201ENST00000231134 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 GNL2Q13823 731 aaKnown RBP16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 TMCO3Q6UWJ1 677 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 HDAC5Q9UQL6 1122 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 MRVI1Q9Y6F6 885 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 MYO1CO00159 1063 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 SOX12O15370 315 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 LMAN1P49257 510 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 GPS2Q13227 327 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 BICD2Q8TD16 824 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 CLCN6P51797 869 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 PDE1AP54750 535 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 FUCA2Q9BTY2 467 aa16.19■□□□□ 0.18
PCDHB5-201ENST00000231134 SYCP2Q9BX26 1530 aa16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 DHX16O60231 1041 aaKnown RBP16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 SEC31AO94979 1220 aaKnown RBP16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 ZSCAN26Q16670 478 aa16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 PLEKHF1Q96S99 279 aa16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 TPM4P67936 248 aa16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 LRRN4CLQ8ND94 238 aa16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 MEIS3Q99687 375 aa16.18■□□□□ 0.18
PCDHB5-201ENST00000231134 BECN2A8MW95 431 aa16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 PNMA6AP0CW24 399 aaPredicted RBP16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 SMARCE1Q969G3 411 aa16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 ATP10BO94823 1461 aa16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
PCDHB5-201ENST00000231134 A0A087WWV3 80 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 GJB2P29033 226 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 MNS1Q8NEH6 495 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 UBXN4Q92575 508 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 CCDC69A6NI79 296 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 ANKRD65E5RJM6 399 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 CEP85Q6P2H3 762 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 GOLGA6L1Q8N7Z2 621 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 EFCC1Q9HA90 598 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
PCDHB5-201ENST00000231134 F6X3S4 739 aa16.15■□□□□ 0.18
PCDHB5-201ENST00000231134 SART3Q15020 963 aaKnown RBP16.15■□□□□ 0.18
PCDHB5-201ENST00000231134 CCAR2Q8N163 923 aaKnown RBP16.15■□□□□ 0.18
PCDHB5-201ENST00000231134 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
PCDHB5-201ENST00000231134 SHANK2Q9UPX8 1470 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1367.7 ms