RNA–Protein interactions for RNA: ENST00000229554.9

RSPH4A-201, Transcript of radial spoke head component 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPH4A, Length 2,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH4A-201ENST00000229554 CPA1P15085 419 aa9.68□□□□□ -0.86
RSPH4A-201ENST00000229554 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 ARHGAP45Q92619 1136 aa9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 TMX3Q96JJ7 454 aa9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 PTMAP06454 111 aaKnown RBP9.67□□□□□ -0.86
RSPH4A-201ENST00000229554 NUCB2P80303 420 aa9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 CASC1Q6TDU7 716 aa9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 TSPYL4Q9UJ04 414 aa9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 CHMP3Q9Y3E7 222 aa9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 WASLO00401 505 aaPredicted RBP9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 PDE1AP54750 535 aa9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 FKBP5Q13451 457 aaPredicted RBP9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 CYB5RLQ6IPT4 315 aa9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
RSPH4A-201ENST00000229554 RTL1A6NKG5 1358 aa9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 ERC2O15083 957 aa9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 PLCD3Q8N3E9 789 aa9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 PTCH1Q13635 1447 aa9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 ANXA1P04083 346 aa9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 DNTTIP2Q5QJE6 756 aaKnown RBP9.65□□□□□ -0.86
RSPH4A-201ENST00000229554 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.87
RSPH4A-201ENST00000229554 ALKQ9UM73 1620 aa9.65□□□□□ -0.87
RSPH4A-201ENST00000229554 PPP1R9BQ96SB3 815 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 CCDC9Q9Y3X0 531 aaKnown RBP9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 CYP2E1P05181 493 aaPredicted RBP9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 MTHFSDQ2M296 383 aaKnown RBP9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 ATP7BP35670 1465 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 UQCRHLA0A096LP55 91 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 REC8O95072 547 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 UQCRHP07919 91 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 EIF2S2P20042 333 aaKnown RBP9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 LRRFIP2Q9Y608 721 aaKnown RBP9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
RSPH4A-201ENST00000229554 METP08581 1390 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 PRR36Q9H6K5 1346 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 SLC26A8Q96RN1 970 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 SETD1AO15047 1707 aaKnown RBP9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 LMOD3Q0VAK6 560 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 RPAP2Q8IXW5 612 aaPredicted RBP9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 RTF1Q92541 710 aaKnown RBP9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 RBM33Q96EV2 1170 aaKnown RBP9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 CCDC61Q9Y6R9 512 aa9.63□□□□□ -0.87
RSPH4A-201ENST00000229554 ZNF445P59923 1031 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 CPS1P31327 1500 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 ARHGEF40Q8TER5 1519 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 CHL1O00533 1208 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 OFD1O75665 1012 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 TTC12Q9H892 705 aaPredicted RBP9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
RSPH4A-201ENST00000229554 FIBPO43427 364 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 PHAXQ9H814 394 aaKnown RBP9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 MAP3K19Q56UN5 1328 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 MX1P20591 662 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 LRSAM1Q6UWE0 723 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 USP48Q86UV5 1035 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 ESYT1Q9BSJ8 1104 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 RGS12O14924 1447 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 ACEP12821 1306 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 DIP2BQ9P265 1576 aa9.61□□□□□ -0.87
RSPH4A-201ENST00000229554 HCLS1P14317 486 aaPredicted RBP9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 CWC27Q6UX04 472 aaKnown RBP9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 TCEANC2Q96MN5 208 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 LRRCC1Q9C099 1032 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 RIMBP3CA6NJZ7 1639 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 RIMBP3BA6NNM3 1639 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 RIMBP3Q9UFD9 1639 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 HMMRO75330 724 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 SURF6O75683 361 aaKnown RBP9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 GNAI2P04899 355 aa9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 COL9A3Q14050 684 aaPredicted RBP9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 NOL7Q9UMY1 257 aaKnown RBP9.6□□□□□ -0.87
RSPH4A-201ENST00000229554 CHMLP26374 656 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 AMPHP49418 695 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 FAM69CQ0P6D2 419 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 FLIIQ13045 1269 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 FAM173BQ6P4H8 233 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 STK31Q9BXU1 1019 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 DLG5Q8TDM6 1919 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 PTMSP20962 102 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 TICAM2Q86XR7 235 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 SPC24Q8NBT2 197 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 CWC22Q9HCG8 908 aaKnown RBP9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 ZKSCAN5Q9Y2L8 839 aa9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
RSPH4A-201ENST00000229554 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms