RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 ERVV-2B6SEH9 535 aa18.22■□□□□ 0.51
UPK1A-201ENST00000222275 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
UPK1A-201ENST00000222275 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
UPK1A-201ENST00000222275 AMOTQ4VCS5 1084 aa18.21■□□□□ 0.51
UPK1A-201ENST00000222275 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
UPK1A-201ENST00000222275 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
UPK1A-201ENST00000222275 MSH5O43196 834 aa18.2■□□□□ 0.5
UPK1A-201ENST00000222275 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
UPK1A-201ENST00000222275 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
UPK1A-201ENST00000222275 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
UPK1A-201ENST00000222275 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
UPK1A-201ENST00000222275 COL3A1P02461 1466 aaPredicted RBP18.18■□□□□ 0.5
UPK1A-201ENST00000222275 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
UPK1A-201ENST00000222275 CABP4P57796 275 aa18.17■□□□□ 0.5
UPK1A-201ENST00000222275 NLGN2Q8NFZ4 835 aa18.17■□□□□ 0.5
UPK1A-201ENST00000222275 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
UPK1A-201ENST00000222275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
UPK1A-201ENST00000222275 PHF14O94880 888 aa18.16■□□□□ 0.5
UPK1A-201ENST00000222275 HSP90AB1P08238 724 aaKnown RBP18.16■□□□□ 0.5
UPK1A-201ENST00000222275 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
UPK1A-201ENST00000222275 C5P01031 1676 aa18.15■□□□□ 0.5
UPK1A-201ENST00000222275 COL24A1Q17RW2 1714 aa18.15■□□□□ 0.5
UPK1A-201ENST00000222275 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
UPK1A-201ENST00000222275 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
UPK1A-201ENST00000222275 AK7Q96M32 723 aa18.15■□□□□ 0.5
UPK1A-201ENST00000222275 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
UPK1A-201ENST00000222275 PTCD1O75127 700 aaKnown RBP18.14■□□□□ 0.49
UPK1A-201ENST00000222275 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.49
UPK1A-201ENST00000222275 C4BP0C0L5 1744 aa18.14■□□□□ 0.49
UPK1A-201ENST00000222275 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
UPK1A-201ENST00000222275 POLD1P28340 1107 aa18.13■□□□□ 0.49
UPK1A-201ENST00000222275 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
UPK1A-201ENST00000222275 GNPATO15228 680 aa18.12■□□□□ 0.49
UPK1A-201ENST00000222275 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
UPK1A-201ENST00000222275 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
UPK1A-201ENST00000222275 SLC39A6Q13433 755 aa18.12■□□□□ 0.49
UPK1A-201ENST00000222275 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
UPK1A-201ENST00000222275 PHACTR3Q96KR7 559 aa18.12■□□□□ 0.49
UPK1A-201ENST00000222275 FCHSD2O94868 740 aa18.11■□□□□ 0.49
UPK1A-201ENST00000222275 NEFMP07197 916 aa18.11■□□□□ 0.49
UPK1A-201ENST00000222275 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
UPK1A-201ENST00000222275 FLAD1Q8NFF5 587 aa18.11■□□□□ 0.49
UPK1A-201ENST00000222275 UBR3Q6ZT12 1888 aa18.1■□□□□ 0.49
UPK1A-201ENST00000222275 SSFA2P28290 1259 aa18.1■□□□□ 0.49
UPK1A-201ENST00000222275 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
UPK1A-201ENST00000222275 SLC52A2Q9HAB3 445 aa18.1■□□□□ 0.49
UPK1A-201ENST00000222275 YY1P25490 414 aa18.09■□□□□ 0.49
UPK1A-201ENST00000222275 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
UPK1A-201ENST00000222275 MYH14Q7Z406 1995 aaKnown RBP18.08■□□□□ 0.49
UPK1A-201ENST00000222275 CCER2I3L3R5 266 aa18.08■□□□□ 0.48
UPK1A-201ENST00000222275 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
UPK1A-201ENST00000222275 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.48
UPK1A-201ENST00000222275 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
UPK1A-201ENST00000222275 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
UPK1A-201ENST00000222275 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
UPK1A-201ENST00000222275 YBX3P16989 372 aaKnown RBP eCLIP18.06■□□□□ 0.48
UPK1A-201ENST00000222275 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
UPK1A-201ENST00000222275 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
UPK1A-201ENST00000222275 TRAPPC3LQ5T215 181 aa18.05■□□□□ 0.48
UPK1A-201ENST00000222275 RTCBQ9Y3I0 505 aaKnown RBP18.05■□□□□ 0.48
UPK1A-201ENST00000222275 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
UPK1A-201ENST00000222275 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
UPK1A-201ENST00000222275 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
UPK1A-201ENST00000222275 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
UPK1A-201ENST00000222275 GYS1P13807 737 aa18.03■□□□□ 0.48
UPK1A-201ENST00000222275 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
UPK1A-201ENST00000222275 GPR162Q16538 588 aa18.03■□□□□ 0.48
UPK1A-201ENST00000222275 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
UPK1A-201ENST00000222275 SRP68Q9UHB9 627 aaKnown RBP18.03■□□□□ 0.48
UPK1A-201ENST00000222275 MAPK8IP3Q9UPT6 1336 aa18.02■□□□□ 0.48
UPK1A-201ENST00000222275 KCNQ3O43525 872 aa18.02■□□□□ 0.48
UPK1A-201ENST00000222275 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
UPK1A-201ENST00000222275 CD2APQ9Y5K6 639 aa18.02■□□□□ 0.48
UPK1A-201ENST00000222275 MMP10P09238 476 aa18.01■□□□□ 0.47
UPK1A-201ENST00000222275 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
UPK1A-201ENST00000222275 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
UPK1A-201ENST00000222275 MRC1P22897 1456 aa18.01■□□□□ 0.47
UPK1A-201ENST00000222275 ADAMTS7Q9UKP4 1686 aa18■□□□□ 0.47
UPK1A-201ENST00000222275 GNAT3A8MTJ3 354 aa18■□□□□ 0.47
UPK1A-201ENST00000222275 WWC3Q9ULE0 1092 aa18■□□□□ 0.47
UPK1A-201ENST00000222275 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
UPK1A-201ENST00000222275 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
UPK1A-201ENST00000222275 COL5A3P25940 1745 aaPredicted RBP17.99■□□□□ 0.47
UPK1A-201ENST00000222275 FKBP8Q14318 412 aa17.99■□□□□ 0.47
UPK1A-201ENST00000222275 CCDC184Q52MB2 194 aa17.99■□□□□ 0.47
UPK1A-201ENST00000222275 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
UPK1A-201ENST00000222275 ADRA2BP18089 450 aa17.98■□□□□ 0.47
UPK1A-201ENST00000222275 RFC4P35249 363 aa17.98■□□□□ 0.47
UPK1A-201ENST00000222275 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
UPK1A-201ENST00000222275 MIER1Q8N108 512 aa17.98■□□□□ 0.47
UPK1A-201ENST00000222275 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
UPK1A-201ENST00000222275 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
UPK1A-201ENST00000222275 TJP1Q07157 1748 aa17.98■□□□□ 0.47
UPK1A-201ENST00000222275 PLEKHF1Q96S99 279 aa17.97■□□□□ 0.47
UPK1A-201ENST00000222275 CCDC87Q9NVE4 849 aa17.97■□□□□ 0.47
UPK1A-201ENST00000222275 CEMIPQ8WUJ3 1361 aa17.96■□□□□ 0.47
UPK1A-201ENST00000222275 MCM10Q7L590 875 aa17.96■□□□□ 0.47
UPK1A-201ENST00000222275 NLGN1Q8N2Q7 840 aa17.96■□□□□ 0.47
UPK1A-201ENST00000222275 ZNF784Q8NCA9 323 aaPredicted RBP17.96■□□□□ 0.47
UPK1A-201ENST00000222275 ZBTB1Q9Y2K1 713 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms