RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 GPATCH8Q9UKJ3 1502 aaKnown RBP5.17□□□□□ -1.58
CHD9-201ENST00000219084 KLHL40Q2TBA0 621 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 HSP90AB2PQ58FF8 381 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 SLC26A8Q96RN1 970 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 CCDC181Q5TID7 509 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 LTV1Q96GA3 475 aaPredicted RBP5.17□□□□□ -1.58
CHD9-201ENST00000219084 BCL11BQ9C0K0 894 aaPredicted RBP5.17□□□□□ -1.58
CHD9-201ENST00000219084 CLASP1Q7Z460 1538 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 CASZ1Q86V15 1759 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 CCDC69A6NI79 296 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 STX1AQ16623 288 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 WASHC4Q2M389 1173 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 TTC39AQ5SRH9 613 aa5.17□□□□□ -1.58
CHD9-201ENST00000219084 AK9Q5TCS8 1911 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 FIBPO43427 364 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 SRRTQ9BXP5 876 aaKnown RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 ELL2O00472 640 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 TMPOP42166 694 aaKnown RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 AMOTQ4VCS5 1084 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 TMCO3Q6UWJ1 677 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 COL17A1Q9UMD9 1497 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 YEATS2Q9ULM3 1422 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 ATF3P18847 181 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 UBE2HP62256 183 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 AXDND1Q5T1B0 1012 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 KCNH5Q8NCM2 988 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 RBM33Q96EV2 1170 aaKnown RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 ZSCAN16Q9H4T2 348 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 ZNF518AQ6AHZ1 1483 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 SHTN1A0MZ66 631 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 PPP1R12BO60237 982 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 KIF5CO60282 957 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 GBP2P32456 591 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 PTPN14Q15678 1187 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 TBC1D32Q96NH3 1257 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 EPB41L2O43491 1005 aaKnown RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 RARSP54136 660 aaKnown RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 HDGFL1Q5TGJ6 251 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 UBXN4Q92575 508 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 CABP2Q9NPB3 220 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 ADCY10Q96PN6 1610 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 CDC42BPAQ5VT25 1732 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 SYCP2Q9BX26 1530 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 KIF20AO95235 890 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 MX1P20591 662 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 VPS36Q86VN1 386 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 CDK19Q9BWU1 502 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 BMP2KQ9NSY1 1161 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 BRPF3Q9ULD4 1205 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 SLC4A2P04920 1241 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 HMOX1P09601 288 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 TRIM21P19474 475 aaKnown RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 FOXD4L6Q3SYB3 417 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 FOXD4L3Q6VB84 417 aaPredicted RBP5.16□□□□□ -1.58
CHD9-201ENST00000219084 FMNL2Q96PY5 1086 aa5.16□□□□□ -1.58
CHD9-201ENST00000219084 GNAT3A8MTJ3 354 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 EZRP15311 586 aaKnown RBP5.15□□□□□ -1.58
CHD9-201ENST00000219084 LUZP1Q86V48 1076 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 ABCC2Q92887 1545 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 SPHKAPQ2M3C7 1700 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 POLR3AO14802 1390 aaPredicted RBP5.15□□□□□ -1.58
CHD9-201ENST00000219084 KDM5CP41229 1560 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 BMP15O95972 392 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 NBPF8Q3BBV2 869 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 ATL3Q6DD88 541 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 FAM114A1Q8IWE2 563 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 UBE2Q2Q8WVN8 375 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 CDCA7LQ96GN5 454 aa5.15□□□□□ -1.58
CHD9-201ENST00000219084 FANCAO15360 1455 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 C11orf95C9JLR9 678 aaPredicted RBP5.15□□□□□ -1.59
CHD9-201ENST00000219084 IVLP07476 585 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 RBM25P49756 843 aaKnown RBP5.15□□□□□ -1.59
CHD9-201ENST00000219084 THEMISQ8N1K5 641 aaPredicted RBP5.15□□□□□ -1.59
CHD9-201ENST00000219084 LIMCH1Q9UPQ0 1083 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 URB2Q14146 1524 aaKnown RBP5.15□□□□□ -1.59
CHD9-201ENST00000219084 CASQ1P31415 396 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 NEUROD6Q96NK8 337 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 PLB1Q6P1J6 1458 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 GOLIM4O00461 696 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 TERF1P54274 439 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 CDC42BPBQ9Y5S2 1711 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 CLCN1P35523 988 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 ARHGAP29Q52LW3 1261 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 RNF214Q8ND24 703 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 PRAM1Q96QH2 718 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 CRACR2AQ9BSW2 395 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 RAB34Q9BZG1 259 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 HYPKQ9NX55 129 aa5.15□□□□□ -1.59
CHD9-201ENST00000219084 BLMP54132 1417 aaPredicted RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 EIF4G3O43432 1585 aaKnown RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 TATP17735 454 aaPredicted RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 CASTP20810 708 aaKnown RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 DNAAF4Q8WXU2 420 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 NAA15Q9BXJ9 866 aaKnown RBP5.14□□□□□ -1.59
CHD9-201ENST00000219084 CACNA1FO60840 1977 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 PREX2Q70Z35 1606 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 CTAGE1Q96RT6 745 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 PIK3R4Q99570 1358 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 BCAR3O75815 825 aa5.14□□□□□ -1.59
CHD9-201ENST00000219084 TTC37Q6PGP7 1564 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms