RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 AMPHP49418 695 aa16.29■□□□□ 0.2
SRP54-201ENST00000216774 MCM2P49736 904 aa16.29■□□□□ 0.2
SRP54-201ENST00000216774 LRRCC1Q9C099 1032 aa16.29■□□□□ 0.2
SRP54-201ENST00000216774 TUBGCP6Q96RT7 1819 aa16.29■□□□□ 0.2
SRP54-201ENST00000216774 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
SRP54-201ENST00000216774 FLIIQ13045 1269 aa16.29■□□□□ 0.2
SRP54-201ENST00000216774 BABAM1Q9NWV8 329 aa16.29■□□□□ 0.2
SRP54-201ENST00000216774 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
SRP54-201ENST00000216774 PXDNLA1KZ92 1463 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
SRP54-201ENST00000216774 EID1Q9Y6B2 187 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 PIK3C2AO00443 1686 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 DIP2AQ14689 1571 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 ERBB4Q15303 1308 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 PKP1Q13835 747 aa16.28■□□□□ 0.2
SRP54-201ENST00000216774 SLIT1O75093 1534 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 AK9Q5TCS8 1911 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 MX1P20591 662 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 ANAPC15P60006 121 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 ATP8B2P98198 1209 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
SRP54-201ENST00000216774 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.2
SRP54-201ENST00000216774 MCCP23508 829 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
SRP54-201ENST00000216774 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 TBX22Q9Y458 520 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 FKBP5Q13451 457 aaPredicted RBP16.26■□□□□ 0.19
SRP54-201ENST00000216774 ZSCAN23Q3MJ62 389 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 IL17RAQ96F46 866 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 SLC26A8Q96RN1 970 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 ARHGAP23Q9P227 1491 aa16.26■□□□□ 0.19
SRP54-201ENST00000216774 AOX1Q06278 1338 aa16.25■□□□□ 0.19
SRP54-201ENST00000216774 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
SRP54-201ENST00000216774 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
SRP54-201ENST00000216774 USP54Q70EL1 1684 aa16.25■□□□□ 0.19
SRP54-201ENST00000216774 ANKARQ7Z5J8 1434 aa16.24■□□□□ 0.19
SRP54-201ENST00000216774 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
SRP54-201ENST00000216774 NEK4P51957 841 aa16.24■□□□□ 0.19
SRP54-201ENST00000216774 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
SRP54-201ENST00000216774 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
SRP54-201ENST00000216774 NWD1Q149M9 1564 aa16.24■□□□□ 0.19
SRP54-201ENST00000216774 PNMA6EA0A0J9YXQ4 647 aa16.24■□□□□ 0.19
SRP54-201ENST00000216774 CHMLP26374 656 aa16.23■□□□□ 0.19
SRP54-201ENST00000216774 CUL4AQ13619 759 aa16.23■□□□□ 0.19
SRP54-201ENST00000216774 TMX3Q96JJ7 454 aa16.23■□□□□ 0.19
SRP54-201ENST00000216774 NCLP19338 710 aaKnown RBP16.22■□□□□ 0.19
SRP54-201ENST00000216774 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
SRP54-201ENST00000216774 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
SRP54-201ENST00000216774 HOXC9P31274 260 aa16.22■□□□□ 0.19
SRP54-201ENST00000216774 RGPD8O14715 1765 aaPredicted RBP16.22■□□□□ 0.19
SRP54-201ENST00000216774 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
SRP54-201ENST00000216774 LRRFIP2Q9Y608 721 aaKnown RBP16.21■□□□□ 0.19
SRP54-201ENST00000216774 NLRP6P59044 892 aa16.21■□□□□ 0.19
SRP54-201ENST00000216774 HS1BP3Q53T59 392 aa16.21■□□□□ 0.19
SRP54-201ENST00000216774 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.19
SRP54-201ENST00000216774 GPT2Q8TD30 523 aa16.21■□□□□ 0.19
SRP54-201ENST00000216774 MARF1Q9Y4F3 1742 aaKnown RBP16.21■□□□□ 0.18
SRP54-201ENST00000216774 IL17REQ8NFR9 667 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 USP44Q9H0E7 712 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 TRIM6-TRIM34B2RNG4 842 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 BRD1O95696 1058 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 MBD3O95983 291 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
SRP54-201ENST00000216774 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 SSH3Q8TE77 659 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 ANO2Q9NQ90 1003 aa16.2■□□□□ 0.18
SRP54-201ENST00000216774 RAB11FIP3O75154 756 aa16.19■□□□□ 0.18
SRP54-201ENST00000216774 RILPL2Q969X0 211 aa16.19■□□□□ 0.18
SRP54-201ENST00000216774 PALD1Q9ULE6 856 aa16.19■□□□□ 0.18
SRP54-201ENST00000216774 HDGFL1Q5TGJ6 251 aa16.17■□□□□ 0.18
SRP54-201ENST00000216774 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
SRP54-201ENST00000216774 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
SRP54-201ENST00000216774 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
SRP54-201ENST00000216774 PRIM1P49642 420 aaKnown RBP16.16■□□□□ 0.18
SRP54-201ENST00000216774 POLA2Q14181 598 aa16.16■□□□□ 0.18
SRP54-201ENST00000216774 LRSAM1Q6UWE0 723 aa16.16■□□□□ 0.18
SRP54-201ENST00000216774 PDLIM2Q96JY6 352 aa16.16■□□□□ 0.18
SRP54-201ENST00000216774 CEMIPQ8WUJ3 1361 aa16.16■□□□□ 0.18
SRP54-201ENST00000216774 HOXB7P09629 217 aa16.15■□□□□ 0.18
SRP54-201ENST00000216774 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
SRP54-201ENST00000216774 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
SRP54-201ENST00000216774 HSPA4P34932 840 aa16.15■□□□□ 0.18
SRP54-201ENST00000216774 TMEM63CQ9P1W3 806 aa16.15■□□□□ 0.18
SRP54-201ENST00000216774 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
SRP54-201ENST00000216774 PRKCSHP14314 528 aaPredicted RBP16.14■□□□□ 0.17
SRP54-201ENST00000216774 CEBPAP49715 358 aaPredicted RBP16.14■□□□□ 0.17
SRP54-201ENST00000216774 THEMISQ8N1K5 641 aaPredicted RBP16.14■□□□□ 0.17
SRP54-201ENST00000216774 MSNP26038 577 aaKnown RBP16.14■□□□□ 0.17
SRP54-201ENST00000216774 ABTB2Q8N961 1025 aa16.14■□□□□ 0.17
SRP54-201ENST00000216774 PPP1R42Q7Z4L9 355 aa16.13■□□□□ 0.17
SRP54-201ENST00000216774 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
SRP54-201ENST00000216774 RHPN1Q8TCX5 695 aa16.12■□□□□ 0.17
SRP54-201ENST00000216774 KIF1BPQ96EK5 621 aa16.12■□□□□ 0.17
SRP54-201ENST00000216774 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms