RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 ZNF75DP51815 510 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 DHX37Q8IY37 1157 aaKnown RBP10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CACTINQ8WUQ7 758 aaKnown RBP10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 DCTPP1Q9H773 170 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CBX8Q9HC52 389 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CCDC69A6NI79 296 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 MYO1CO00159 1063 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 TTLL5Q6EMB2 1281 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 SLC26A8Q96RN1 970 aa10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 MYCBPQ99417 103 aaPredicted RBP10.33□□□□□ -0.76
SUPT16H-201ENST00000216297 CYP2C19P33261 490 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 PALD1Q9ULE6 856 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 H3BQV1 296 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 GJB2P29033 226 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 GYS2P54840 703 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 SLC20A2Q08357 652 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 HSP90B2PQ58FF3 399 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 RPAP2Q8IXW5 612 aaPredicted RBP10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 NPC1L1Q9UHC9 1359 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 NEMFO60524 1076 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 FOSBP53539 338 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 STK26Q9P289 416 aa10.32□□□□□ -0.76
SUPT16H-201ENST00000216297 A0A1B0GUL7 405 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 CLGNO14967 610 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 SIRT2Q8IXJ6 389 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 TSPYL6Q8N831 410 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 ESYT1Q9BSJ8 1104 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 USP16Q9Y5T5 823 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 TMEM132EQ6IEE7 984 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 BANK1Q8NDB2 785 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 DNAI1Q9UI46 699 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 CUL7Q14999 1698 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 HSP90B1P14625 803 aaKnown RBP10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 OAS2P29728 719 aaKnown RBP10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 SETQ01105 290 aaPredicted RBP10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 NUTM2DQ5VT03 806 aaPredicted RBP10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 CC2D2AQ9P2K1 1620 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 FAM173BQ6P4H8 233 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 LIMCH1Q9UPQ0 1083 aa10.31□□□□□ -0.76
SUPT16H-201ENST00000216297 SCAF11Q99590 1463 aaKnown RBP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 DHX16O60231 1041 aaKnown RBP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 ICE2Q659A1 982 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 KLHL34Q8N239 644 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 ZCCHC17Q9NP64 241 aaKnown RBP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 CLASP1Q7Z460 1538 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 AP5Z1O43299 807 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 STAG3Q9UJ98 1225 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 CLCN6P51797 869 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 HAP1P54257 671 aaPredicted RBP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 E2F4Q16254 413 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 MRPL50Q8N5N7 158 aaKnown RBP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 CABP2Q9NPB3 220 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 SFPQP23246 707 aaKnown RBP eCLIP10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 PDE1AP54750 535 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 FAM193AP78312 1265 aa10.3□□□□□ -0.76
SUPT16H-201ENST00000216297 PNMA6AP0CW24 399 aaPredicted RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 MLECQ14165 292 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 ARID5BQ14865 1188 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 CCDC73Q6ZRK6 1079 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 USP27XA6NNY8 438 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 ZNF526Q8TF50 670 aaPredicted RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 TOPBP1Q92547 1522 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 SEC31AO94979 1220 aaKnown RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 MNAT1P51948 309 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 MCM6Q14566 821 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 ZSWIM4Q9H7M6 989 aa10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 RRP15Q9Y3B9 282 aaKnown RBP10.29□□□□□ -0.76
SUPT16H-201ENST00000216297 ARFGAP3Q9NP61 516 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 E9PCH4 1651 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 STK3Q13188 491 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 CUL4AQ13619 759 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 JAKMIP1Q96N16 626 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 LRRCC1Q9C099 1032 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 IL1RAPL2Q9NP60 686 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 CPA1P15085 419 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 ZKSCAN1P17029 563 aaPredicted RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 LRRC8AQ8IWT6 810 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 DDX19AQ9NUU7 478 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 KINO60870 393 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 VAMP4O75379 141 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 LIG1P18858 919 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 SMC1AQ14683 1233 aaKnown RBP10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 ANKRD44Q8N8A2 993 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 SMARCE1Q969G3 411 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 PDRG1Q9NUG6 133 aa10.28□□□□□ -0.76
SUPT16H-201ENST00000216297 VPS18Q9P253 973 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms