RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Zeb2Q9R0G7 1215 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Fam50bQ9WTJ8 334 aa18■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Hspa1lP16627 641 aa17.99■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Sv2bQ8BG39 683 aa17.99■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Qtrt2B8ZXI1 415 aa17.98■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Asic4Q7TNS7 539 aa17.98■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Tmem119Q8R138 280 aa17.98■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Ccdc183A2AJB1 534 aa17.98■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Mre11Q61216 706 aa17.98■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Atl3Q91YH5 541 aa17.98■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Aifm3Q3TY86 605 aa17.97■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Nutm1Q8BHP2 1126 aa17.97■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Ak7Q9D2H2 614 aa17.97■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Trim30dE9PWL0 497 aa17.96■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Rangap1P46061 589 aaKnown RBP17.95■□□□□ 0.46
Ssr1-204ENSMUST00000225319 CoilQ5SU73 570 aa17.95■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Ppp2r3aB2RXC8 1150 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Fam83gQ5SWY7 812 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 PsapQ61207 557 aaKnown RBP17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 DiexfQ8BTT6 772 aaKnown RBP17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Speer4bQ9D9F7 267 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Sart3Q9JLI8 962 aaKnown RBP17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Mst1rQ62190 1378 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Shank2Q80Z38 1476 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Fer1l6E0CZ42 1862 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Kcnh4A2A5F7 1018 aa17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Ddx54Q8K4L0 874 aaKnown RBP17.94■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Tiam2Q6ZPF3 1715 aa17.93■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Disp3A3KFU9 1347 aa17.93■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Hsp90ab1P11499 724 aaKnown RBP17.93■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Morc2aQ69ZX6 1030 aa17.93■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Ccdc155Q80VJ8 648 aa17.93■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Larp1Q6ZQ58 1072 aaKnown RBP17.92■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Slc5a1Q8C3K6 665 aa17.92■□□□□ 0.46
Ssr1-204ENSMUST00000225319 GckrQ91X44 587 aa17.92■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Taf7Q9R1C0 341 aa17.92■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Lrp6O88572 1613 aa17.91■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Tjp1P39447 1745 aaKnown RBP17.91■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Shank3Q4ACU6 1730 aa17.91■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Gm21680A0A0G2JGR8 267 aa17.91■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Iqsec3Q3TES0 1195 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Gm21663A0A0G2JE01 267 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Gm7361D3Z6R1 267 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 5031410I06RikE9Q4E0 267 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Gm1979E9QAN3 267 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Gm5862K7N5V5 267 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Gm10220K7N660 267 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Aplp1Q03157 653 aa17.9■□□□□ 0.46
Ssr1-204ENSMUST00000225319 Tnnt1O88346 262 aa17.89■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Cyp2d11P24457 504 aa17.89■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Echdc1Q9D9V3 322 aa17.89■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Flt4P35917 1363 aa17.88■□□□□ 0.45
Ssr1-204ENSMUST00000225319 4930567H17RikQ3V0K5 233 aa17.88■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Ppp1r9bQ6R891 817 aaKnown RBP17.88■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Ginm1Q91WR6 327 aa17.88■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Pdia6Q922R8 440 aaKnown RBP17.88■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Cacna1sQ02789 1880 aa17.88■□□□□ 0.45
Ssr1-204ENSMUST00000225319 AU019823E9PUQ3 292 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Tm6sf1P58749 370 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Wwc1Q5SXA9 1104 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Slc5a4bQ91ZP4 660 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Eif2s2Q99L45 331 aaKnown RBP17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Elp1Q7TT37 1333 aaKnown RBP17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Mast2Q60592 1734 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Crb1Q8VHS2 1405 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Fkbp4P30416 458 aa17.87■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Ints5Q8CHT3 1018 aa17.86■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Atg3Q9CPX6 314 aa17.86■□□□□ 0.45
Ssr1-204ENSMUST00000225319 TefQ9JLC6 301 aa17.86■□□□□ 0.45
Ssr1-204ENSMUST00000225319 AceP09470 1312 aa17.86■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Phlpp2Q8BXA7 1320 aa17.86■□□□□ 0.45
Ssr1-204ENSMUST00000225319 SympkQ80X82 1284 aa17.85■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Nwd2Q6P5U7 1742 aa17.84■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Pm20d1Q8C165 503 aa17.84■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Adcy9P51830 1353 aa17.84■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Sik1Q60670 779 aa17.83■□□□□ 0.45
Ssr1-204ENSMUST00000225319 HnrnpuQ8VEK3 800 aaKnown RBP17.83■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Armcx1Q9CX83 456 aa17.83■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Stk36Q69ZM6 1316 aa17.83■□□□□ 0.45
Ssr1-204ENSMUST00000225319 Prkar2bP31324 416 aa17.83■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Vps33bP59016 617 aa17.83■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Ccdc129Q14B48 1034 aa17.83■□□□□ 0.44
Ssr1-204ENSMUST00000225319 SkilQ60665 675 aa17.83■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Efcab2Q9CQ46 164 aa17.83■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Tbc1d32Q3URV1 1296 aa17.82■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Trim27Q62158 513 aa17.82■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Cluap1Q8R3P7 413 aa17.82■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Map7O88735 730 aa17.81■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Irx6Q9ER75 438 aa17.81■□□□□ 0.44
Ssr1-204ENSMUST00000225319 ScaperF8VQ70 1398 aaKnown RBP17.81■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Nhsl1Q8CAF4 1587 aa17.81■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Erbb4Q61527 1308 aa17.8■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Cers3Q1A3B0 383 aa17.8■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Tnrc6cQ3UHC0 1690 aaKnown RBP17.8■□□□□ 0.44
Ssr1-204ENSMUST00000225319 LifrP42703 1092 aa17.8■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Bend3Q6PAL0 825 aa17.8■□□□□ 0.44
Ssr1-204ENSMUST00000225319 PigbQ9JJQ0 542 aa17.8■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Rabep1O35551 862 aa17.79■□□□□ 0.44
Ssr1-204ENSMUST00000225319 DaxxO35613 739 aa17.79■□□□□ 0.44
Ssr1-204ENSMUST00000225319 Cnnm1Q0GA42 951 aa17.79■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 60.8 ms