RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Gm21663A0A0G2JE01 267 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 5031410I06RikE9Q4E0 267 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm1979E9QAN3 267 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm5862K7N5V5 267 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm10220K7N660 267 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 HnrnpmQ9D0E1 729 aaKnown RBP12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ccdc83Q9D4V3 305 aa12.42□□□□□ -0.42
Nup50-201ENSMUST00000165443 Spty2d1Q68FG3 682 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 ZgpatQ8VDM1 511 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Setd1bQ8CFT2 1985 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 TnikP83510 1323 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Dnmt1P13864 1620 aaKnown RBP12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gas2l3Q3UWW6 683 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Abcf1Q6P542 837 aaKnown RBP12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 ZwintQ9CQU5 252 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Terf2O35144 541 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ankrd1Q9CR42 319 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Speer4bQ9D9F7 267 aa12.41□□□□□ -0.42
Nup50-201ENSMUST00000165443 Fkbp5Q64378 456 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Gm21680A0A0G2JGR8 267 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Znf771Q8BJ90 317 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Kiaa1551Q5DTW7 1521 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ankrd44B2RXR6 993 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 RalgapbQ8BQZ4 1484 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Zkscan7E9PVW1 718 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Limch1Q3UH68 1057 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Bag4Q8CI61 457 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Iqca1Q9CUL5 857 aa12.4□□□□□ -0.42
Nup50-201ENSMUST00000165443 Ubap1lG3UW59 384 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ccdc150Q8CDI7 1110 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Stxbp4Q9WV89 557 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Pik3c2gO70167 1506 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Cpa2Q504N0 417 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Brms1Q99N20 246 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Atxn3Q9CVD2 355 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 4931400O07RikQ9D4M5 137 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Rapgef4Q9EQZ6 1011 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Wdr63B2RY71 923 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Tbc1d32Q3URV1 1296 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Tbc1d9Q3UYK3 1264 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Rsph6aQ8CDR2 708 aa12.39□□□□□ -0.43
Nup50-201ENSMUST00000165443 Dnajc2P54103 621 aaKnown RBP12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 TxlnaQ6PAM1 554 aaKnown RBP12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Igbp1bQ9QZ29 343 aa12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 PaskQ8CEE6 1383 aa12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ccdc172Q810N9 267 aa12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Cep55Q8BT07 462 aa12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ccdc178Q8CDV0 866 aa12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Smarca5Q91ZW3 1051 aaKnown RBP12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Bag3Q9JLV1 577 aaKnown RBP12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Sytl4Q9R0Q1 673 aa12.38□□□□□ -0.43
Nup50-201ENSMUST00000165443 Evi5lH3BKQ3 813 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Paxbp1P58501 919 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Mctp2Q5RJH2 878 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Pik3r4Q8VD65 1358 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Uspl1Q3ULM6 1089 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Frmd3Q8BHD4 595 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Fam43aQ8BUP8 424 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ube2hP62257 183 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Gbp4Q61107 620 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Camsap2Q8C1B1 1461 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Nap1l2P51860 460 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 LarsQ8BMJ2 1178 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 LlphQ9D945 130 aaKnown RBP12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Mapk8ip1Q9WVI9 707 aa12.37□□□□□ -0.43
Nup50-201ENSMUST00000165443 Gse1Q3U3C9 1213 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Bms1Q6PGF5 1284 aaKnown RBP12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ccdc181Q80ZU5 509 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Tmc2Q8R4P4 888 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ccar2Q8VDP4 922 aaKnown RBP12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Slc12a5Q91V14 1138 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Mipol1Q9D9F8 279 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Stx6Q9JKK1 255 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Cfap69Q8BH53 942 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 GphnQ8BUV3 769 aaKnown RBP12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Znf287Q9EQB9 759 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Nap1l5Q9JJF0 156 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 EvcP57680 1005 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Q3UJC8 639 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Rbm27Q5SFM8 1060 aaKnown RBP12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Zeb2Q9R0G7 1215 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Trim30cD3YVI9 513 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Mcm3P25206 812 aaKnown RBP12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Kdm3bQ6ZPY7 1562 aa12.36□□□□□ -0.43
Nup50-201ENSMUST00000165443 Mybbp1aQ7TPV4 1344 aaKnown RBP12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Sf3b2Q3UJB0 878 aaKnown RBP12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Bcl11bQ99PV8 884 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Atf7ipQ7TT18 1306 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Hoxb7P09024 217 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Tspyl3Q3UYP3 334 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ddx58Q6Q899 926 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Hmg20bQ9Z104 317 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Rasa1E9PYG6 1038 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ccdc191J3QQ27 883 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Ankib1Q6ZPS6 1085 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 LyarQ08288 388 aaKnown RBP12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Trim25Q61510 634 aaKnown RBP12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Atf7Q8R0S1 413 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Smtnl1Q99LM3 459 aa12.35□□□□□ -0.43
Nup50-201ENSMUST00000165443 Nucb2P81117 420 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms