RNA–Protein interactions for RNA: ENSMUST00000112371.8

Scn1a-204, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn1a, Length 8,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-204ENSMUST00000112371 Tsen2Q6P7W5 460 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Odf2lQ9D478 642 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Fancd2Q80V62 1450 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Slc7a3P70423 618 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Zc3h18Q0P678 948 aaKnown RBP6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 ImmtQ8CAQ8 757 aaKnown RBP6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Kdm4cQ8VCD7 1054 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Calml4Q91WQ9 153 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Vps36Q91XD6 386 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Utp3Q9JI13 469 aaKnown RBP6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Irx4Q9QY61 515 aa6.32□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Pola1P33609 1465 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ttll13A4Q9F6 804 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Nt5c2Q3V1L4 560 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Camk4P08414 469 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Uggt1Q6P5E4 1551 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Gigyf1Q99MR1 1044 aaKnown RBP6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Adamts12Q811B3 1600 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ube2hP62257 183 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Mrps27Q8BK72 415 aaKnown RBP6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Stk24Q99KH8 431 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Cdc45Q9Z1X9 566 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Slc8a1P70414 970 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Cep63Q3UPP8 700 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Smc5Q8CG46 1101 aaKnown RBP6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 HypkQ9CR41 129 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Q9D9S1 216 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 MrgbpQ9DAT2 204 aa6.31□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Gnai2P08752 355 aaKnown RBP6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Brd3Q8K2F0 726 aaKnown RBP6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Shtn1Q8K2Q9 631 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Clstn1Q9EPL2 979 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ampd3O08739 766 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Mnat1P51949 309 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Cdr1E9Q0B4 517 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ercc3P49135 783 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Kdm2aP59997 1161 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Mug2P28666 1451 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Pcmtd1P59913 357 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ppp1r9bQ6R891 817 aaKnown RBP6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Slc17a8Q8BFU8 601 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Aldh1l1Q8R0Y6 902 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Olr1Q9EQ09 363 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Lrrc9Q8CDN9 1456 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Aox1O54754 1333 aa6.3□□□□□ -1.4
Scn1a-204ENSMUST00000112371 GmnnO88513 206 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Clcn1Q64347 994 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Dclk3Q8BWQ5 790 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Dcaf11Q91VU6 549 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 PcQ05920 1178 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Eif3j1Q3UGC7 261 aaKnown RBP6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Eif3j2Q66JS6 263 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Hirip3Q8BLH7 601 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Kri1Q8VDQ9 704 aaKnown RBP6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Smc1bQ920F6 1248 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Myh6Q02566 1938 aaKnown RBP6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Myh9Q8VDD5 1960 aaKnown RBP6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Zfp853A0A1D5RM95 733 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Atp8b1Q148W0 1251 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Mtmr3Q8K296 1196 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Neo1P97798 1493 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Arid3cA6PWV5 409 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Pafah1b1P63005 410 aaKnown RBP6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Pik3r4Q8VD65 1358 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Maml3D4QGC2 1135 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Abcd1P48410 736 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ano9P86044 747 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Bcl11bQ99PV8 884 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Mkrn1Q9QXP6 481 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Plb1Q3TTY0 1478 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Kdm5bQ80Y84 1544 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Jph4Q80WT0 628 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Aldh8a1Q8BH00 487 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Maip1Q8BHE8 291 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Smc1aQ9CU62 1233 aaKnown RBP6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Cyp46a1Q9WVK8 500 aa6.29□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Cracr2aQ3UP38 310 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Map1bP14873 2464 aaKnown RBP6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Setdb1O88974 1307 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Nucb1Q02819 459 aaKnown RBP6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Olfml1Q8BSH2 233 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ccdc38Q8CDN8 563 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Gm10093D3YYI8 482 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Nolc1E9Q5C9 702 aaKnown RBP6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Hdac1O09106 482 aaKnown RBP6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Dusp27Q148W8 1138 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Fchsd1Q6PFY1 688 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Dmrt2Q8BG36 561 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Micall1Q8BGT6 870 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Rnf41Q8BH75 317 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Uchl5Q9WUP7 329 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 LlphQ9D945 130 aaKnown RBP6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Psme1P97371 249 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Tbc1d32Q3URV1 1296 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Plekhg1F6S200 1446 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Abcc5Q9R1X5 1436 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ccdc88cQ6VGS5 2009 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Swap70Q6A028 585 aaKnown RBP6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Tbc1d31Q6NXY1 996 aa6.28□□□□□ -1.4
Scn1a-204ENSMUST00000112371 Ccar2Q8VDP4 922 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms