RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Akap12Q9WTQ5 1684 aa13.77□□□□□ -0.2
Ssh1-201ENSMUST00000077689 Tnnt1O88346 262 aa13.76□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Kcnf1Q7TSH7 493 aa13.76□□□□□ -0.21
Ssh1-201ENSMUST00000077689 E2f4Q8R0K9 410 aa13.76□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Rbm33Q9CXK9 1231 aaKnown RBP13.76□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Anp32eP97822 260 aaKnown RBP13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 KdrP35918 1367 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Plxnc1Q9QZC2 1574 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Kmt5bQ3U8K7 883 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Casc1Q6TDU8 730 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Dixdc1Q80Y83 711 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Myo1cQ9WTI7 1063 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Synj2Q9D2G5 1434 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Gdpd2Q9ESM6 539 aa13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Utp3Q9JI13 469 aaKnown RBP13.75□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Myom1Q62234 1667 aaKnown RBP13.74□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Paf1Q8K2T8 535 aa13.74□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Mmel1Q9JLI3 765 aa13.74□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Chaf1aQ9QWF0 911 aa13.74□□□□□ -0.21
Ssh1-201ENSMUST00000077689 MaddQ80U28 1577 aa13.74□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ccdc146E9Q9F7 977 aa13.74□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Pcmtd1P59913 357 aa13.73□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ift57Q8BXG3 429 aa13.73□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Txndc2Q6P902 515 aa13.73□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ctr9Q62018 1173 aaKnown RBP13.73□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Nlrp3Q8R4B8 1033 aa13.73□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Nap1l1P28656 391 aaKnown RBP13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Zdhhc9P59268 364 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Psme1P97371 249 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 1700010I14RikQ7TPG0 532 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Sipa1l1Q8C0T5 1782 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Birc3O08863 600 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Gabpb2P81069 414 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Zkscan4Q5SZT6 480 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ccar1Q8CH18 1146 aaKnown RBP13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ppp1r3fQ9JIG4 799 aa13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ahdc1Q6PAL7 1594 aaKnown RBP13.72□□□□□ -0.21
Ssh1-201ENSMUST00000077689 EcsitQ9QZH6 435 aa13.71□□□□□ -0.21
Ssh1-201ENSMUST00000077689 NinlQ6ZQ12 1394 aa13.71□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Ccdc38Q8CDN8 563 aa13.71□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Nek4Q9Z1J2 792 aa13.71□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Kiaa0556Q8C753 1610 aa13.71□□□□□ -0.21
Ssh1-201ENSMUST00000077689 Asxl2Q8BZ32 1370 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Zscan29E9Q5B4 869 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Bach1P97302 739 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Irf6P97431 467 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Zpr1Q62384 459 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Spata32Q8C5V0 334 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Cgref1Q8R1U2 281 aa13.71□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Ranbp1P34022 203 aaKnown RBP13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Tmx4Q8C0L0 335 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Golga5Q9QYE6 729 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Eif2ak4Q9QZ05 1648 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Ttc37F8VPK0 1563 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Fam184aE9PW83 1143 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Klra1P20937 262 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Tbc1d9Q3UYK3 1264 aa13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Sf3a1Q8K4Z5 791 aaKnown RBP13.7□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Arhgap23Q69ZH9 1483 aa13.69□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Adamts7Q68SA9 1657 aa13.69□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Ercc3P49135 783 aa13.69□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Trerf1Q8BXJ2 1205 aa13.69□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Cep170bQ80U49 1574 aa13.69□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Cfdp1O88271 295 aaKnown RBP13.68□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Trim55G3X8Y1 545 aa13.68□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Bicd2Q921C5 820 aa13.68□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Kif24Q6NWW5 1356 aa13.68□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Prdm2A2A7B5 1709 aaKnown RBP13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 SkilQ60665 675 aa13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Oxsr1Q6P9R2 527 aa13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Recql4Q75NR7 1216 aaKnown RBP13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 PtprmP28828 1452 aa13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Znf330Q922H9 316 aa13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Sytl4Q9R0Q1 673 aa13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Rfc1P35601 1131 aa13.67□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Naip7Q9JIB3 1402 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 U2surpQ6NV83 1029 aaKnown RBP13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Otud6bQ8K2H2 294 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 PdiltQ9DAN1 588 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Znf526Q8BI66 675 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Slc12a5Q91V14 1138 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Zkscan3Q91VW9 553 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 NpatQ8BMA5 1420 aa13.66□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Cavin4A2AMM0 362 aa13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Cpa2Q504N0 417 aa13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Fam53cQ8BXQ8 393 aa13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Qser1A2BIE1 1698 aa13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Mtx1P47802 317 aa13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Ap5z1Q3U829 807 aa13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Senp3Q9EP97 568 aaKnown RBP13.65□□□□□ -0.22
Ssh1-201ENSMUST00000077689 Brd1E9PZ26 1189 aaKnown RBP13.65□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Nol12Q8BG17 217 aa13.65□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Q8VDP2 222 aa13.65□□□□□ -0.23
Ssh1-201ENSMUST00000077689 PalmQ9Z0P4 383 aa13.65□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Smarce1O54941 411 aaKnown RBP13.64□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Tpm3P21107 285 aaKnown RBP13.64□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Ca8P28651 291 aa13.64□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Ttc21aQ8C0S4 1314 aa13.64□□□□□ -0.23
Ssh1-201ENSMUST00000077689 Ccdc60Q8C4J0 545 aa13.64□□□□□ -0.23
Ssh1-201ENSMUST00000077689 SufuQ9Z0P7 484 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 88.1 ms