RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Luzp1Q8R4U7 1068 aaKnown RBP12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Smc1aQ9CU62 1233 aaKnown RBP12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Kdm4aQ8BW72 1064 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 4921504E06RikQ8CET2 560 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mug1P28665 1476 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gcc2Q8CHG3 1679 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Cfap73J3QPZ5 306 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mcm5P49718 733 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Odf2lQ9D478 642 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Lmbr1Q9JIT0 490 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mcm6P97311 821 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ccp110Q7TSH4 1004 aa12.44□□□□□ -0.42
Nipbl-201ENSMUST00000052965 A2mQ6GQT1 1474 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Nkx1-2P42580 305 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Znf653Q6YND2 615 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 IqcgQ80W32 419 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 HypkQ9CR41 129 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Cfap65Q3V0B4 1847 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mkrn1Q9QXP6 481 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Map4k4P97820 1233 aaKnown RBP12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Sos1Q62245 1319 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Magi1Q6RHR9 1471 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 CebpzP53569 1052 aaKnown RBP12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Usp25P57080 1055 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Vps18Q8R307 973 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Erich4Q3UNU4 136 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ncapg2Q6DFV1 1138 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Jade2Q6ZQF7 829 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Erc1Q99MI1 1120 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Kif21aQ9QXL2 1672 aa12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mybbp1aQ7TPV4 1344 aaKnown RBP12.43□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Diaph1O08808 1255 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Lrrfip1Q3UZ39 729 aaKnown RBP12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ccdc178Q8CDV0 866 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Pip4k2bQ80XI4 416 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Stx6Q9JKK1 255 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mindy4Q3UQI9 744 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Pde1cQ64338 706 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gigyf2Q6Y7W8 1291 aaKnown RBP12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Srgap3Q812A2 1099 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Vps37cQ8R105 352 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 ZwintQ9CQU5 252 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Zfp91Q62511 572 aa12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Mphosph10Q810V0 681 aaKnown RBP12.42□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gbp1Q01514 589 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Tbc1d9Q3UYK3 1264 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 PsapQ61207 557 aaKnown RBP12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Tmx3Q8BXZ1 456 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Rbm27Q5SFM8 1060 aaKnown RBP12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Rsrc1Q9DBU6 334 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Peg3Q3URU2 1571 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Gm10093D3YYI8 482 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Hdac1O09106 482 aaKnown RBP12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Fsd1Q7TPM6 496 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Tspyl2Q7TQI8 677 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 WizO88286 1684 aaKnown RBP12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Egfem1Q8C088 590 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 MycbpQ9EQS3 103 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ercc3P49135 783 aa12.41□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ddx58Q6Q899 926 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Brd2Q7JJ13 798 aaKnown RBP12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Hip1rQ9JKY5 1068 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Abcc5Q9R1X5 1436 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 KdrP35918 1367 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Pof1bQ8K4L4 587 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Apaf1O88879 1249 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Pabpn1Q8CCS6 302 aaKnown RBP12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Aldh1l1Q8R0Y6 902 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Caskin1Q6P9K8 1431 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ccdc112A0AUP1 442 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Naip5Q9R016 1403 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Ranbp1P34022 203 aaKnown RBP12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Maco1Q7TQE6 664 aaKnown RBP12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Map3k5O35099 1380 aa12.4□□□□□ -0.42
Nipbl-201ENSMUST00000052965 Tex35Q14BK3 207 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Lrrc45Q8CIM1 670 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ppp4r3bQ922R5 820 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 PrxO55103 1391 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cyp26c1B2RXA7 518 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ankrd24Q80VM7 985 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Top1mtQ8R4U6 593 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gm21680A0A0G2JGR8 267 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Armc9Q9D2I5 817 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Cpsf2O35218 782 aaKnown RBP12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gng11P61953 73 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ccdc158Q8CDI6 1109 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Wasf1Q8R5H6 559 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 4933428M09RikQ9D3X3 192 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Anp32cQ64G17 123 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Ccdc12Q8R344 166 aaKnown RBP12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Polr3aB2RXC6 1390 aa12.39□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Mipol1Q9D9F8 279 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Sept14Q9DA97 430 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Pik3c2gO70167 1506 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 RalylQ8BTF8 293 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Brms1Q99N20 246 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Six6os1Q9CTN5 574 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Gm14025A2AP89 1413 aa12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 MlecQ6ZQI3 291 aaKnown RBP12.38□□□□□ -0.43
Nipbl-201ENSMUST00000052965 Smtnl1Q99LM3 459 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms