RNA–Protein interactions for RNA: ENSMUST00000041418.12

Stag1-201, Transcript of Cohesin subunit SA-1, mousemouse

TSL 5 BASIC

Gene Stag1, Length 5,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1-201ENSMUST00000041418 Znhit6Q3UFB2 460 aaKnown RBP10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Rufy2Q8R4C2 606 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Nip7Q9CXK8 180 aaKnown RBP10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Cul5Q9D5V5 780 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Kank1E9Q238 1360 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Gpatch11Q3UFS4 262 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Fam13aQ8BGI4 693 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Ift74Q8BKE9 600 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Spty2d1Q68FG3 682 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Palm3A2TJV2 734 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Ccdc155Q80VJ8 648 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Cdan1Q8CC12 1239 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Kif18aQ91WD7 886 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Epb41l3Q9WV92 929 aa10.59□□□□□ -0.71
Stag1-201ENSMUST00000041418 Pik3c2gO70167 1506 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Dnajc2P54103 621 aaKnown RBP10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Krt85Q9Z2T6 507 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ppip5k1A2ARP1 1436 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Pms1Q8K119 917 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ttc14Q9CSP9 761 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ttll13A4Q9F6 804 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Traf3ip1Q149C2 625 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Gm7347D3YYI9 267 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Speer4aF8VPX6 267 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Cyp7a1Q64505 503 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Cfap45Q9D9U9 551 aa10.58□□□□□ -0.72
Stag1-201ENSMUST00000041418 Atp7aQ64430 1491 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Tmc1Q8R4P5 757 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ccnl1Q52KE7 532 aaKnown RBP10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Taf7Q9R1C0 341 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Znf518aB2RRF6 1478 aaKnown RBP10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Trappc8E9PWG2 1437 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Prkar2bP31324 416 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Maco1Q7TQE6 664 aaKnown RBP10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Tmem266Q8BZB3 538 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ppp1r42Q8R1Z4 357 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 SelenooQ9DBC0 667 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Tnni2P13412 182 aa10.57□□□□□ -0.72
Stag1-201ENSMUST00000041418 Nap1l1P28656 391 aaKnown RBP10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Chpf2Q3UU43 768 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Adck5Q80V03 582 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ccdc39Q9D5Y1 937 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Prpf4bQ61136 1007 aaKnown RBP10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Cep55Q8BT07 462 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Golim4Q8BXA1 655 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ncbp3Q8BZR9 615 aaKnown RBP10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Nup133Q8R0G9 1155 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 VeztQ3ZK22 780 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Glg1Q61543 1175 aaKnown RBP10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Pdcl3Q8BVF2 240 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 RtcbQ99LF4 505 aaKnown RBP10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Gtf3c3Q3TMP1 882 aa10.56□□□□□ -0.72
Stag1-201ENSMUST00000041418 Rufy1Q8BIJ7 712 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Brf1Q8CFK2 676 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ankrd26Q811D2 1581 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Naip5Q9R016 1403 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Nup160Q9Z0W3 1402 aaKnown RBP10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Tnnt2P50752 301 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Cog6Q8R3I3 657 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Plagl1Q9JLQ4 704 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Synj2Q9D2G5 1434 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Mrpl12Q9DB15 201 aaKnown RBP10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Pla2r1Q62028 1487 aa10.55□□□□□ -0.72
Stag1-201ENSMUST00000041418 Drc7Q6V3W6 876 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Fam160b2Q80YR2 744 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 TxlnbQ8VBT1 685 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Trim11Q99PQ2 467 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 RarsQ9D0I9 660 aaKnown RBP10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Atp2b4Q6Q477 1205 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Nphp3Q7TNH6 1325 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ppm1eQ80TL0 749 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Znf704Q9ERQ3 566 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Dnajc10Q9DC23 793 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Eif5P59325 429 aaKnown RBP10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 PzpQ61838 1495 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Pik3r4Q8VD65 1358 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Efcab2Q9CQ46 164 aa10.54□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ncf1Q09014 390 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Cnnm3Q32NY4 713 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Igf2bp2Q5SF07 592 aaKnown RBP10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Map3k2Q61083 619 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Ppip5k2Q6ZQB6 1129 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 GptQ8QZR5 496 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 PxdnQ3UQ28 1475 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Mns1Q61884 491 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Cetn1P41209 172 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Nol12Q8BG17 217 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 NsmfQ99NF2 532 aa10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Thoc2B1AZI6 1594 aaKnown RBP10.53□□□□□ -0.72
Stag1-201ENSMUST00000041418 Taf3Q5HZG4 932 aa10.52□□□□□ -0.72
Stag1-201ENSMUST00000041418 Tmem67Q8BR76 992 aa10.52□□□□□ -0.72
Stag1-201ENSMUST00000041418 Fez1Q8K0X8 392 aa10.52□□□□□ -0.72
Stag1-201ENSMUST00000041418 Phldb2Q8K1N2 1249 aa10.52□□□□□ -0.72
Stag1-201ENSMUST00000041418 Krt25Q8VCW2 446 aa10.52□□□□□ -0.72
Stag1-201ENSMUST00000041418 Qtrt2B8ZXI1 415 aa10.52□□□□□ -0.73
Stag1-201ENSMUST00000041418 Rad23bP54728 416 aa10.52□□□□□ -0.73
Stag1-201ENSMUST00000041418 Cavin2Q63918 418 aaKnown RBP10.52□□□□□ -0.73
Stag1-201ENSMUST00000041418 ThemisQ8BGW0 636 aa10.52□□□□□ -0.73
Stag1-201ENSMUST00000041418 Bag4Q8CI61 457 aa10.52□□□□□ -0.73
Stag1-201ENSMUST00000041418 Amotl2Q8K371 772 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms