RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Gnl2Q99LH1 728 aaKnown RBP19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Gpatch8A2A6A1 1505 aa19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Pik3r4Q8VD65 1358 aa19.43■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Slu7Q8BHJ9 585 aa19.42■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Adck5Q80V03 582 aa19.42■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Paxip1Q6NZQ4 1056 aa19.42■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Strn4P58404 760 aa19.42■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Aplp1Q03157 653 aa19.42■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Ltv1Q6NSQ7 470 aaKnown RBP19.42■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Kdm4aQ8BW72 1064 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 TimelessQ9R1X4 1197 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Ankrd26Q811D2 1581 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Wdr63B2RY71 923 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 NapbP28663 298 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Irf9Q61179 399 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Gtf2a1Q99PM3 378 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Gigyf1Q99MR1 1044 aaKnown RBP19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Galntl5Q9D4M9 431 aa19.41■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Atp7aQ64430 1491 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Trim11Q99PQ2 467 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Ncoa3O09000 1398 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Jmjd4Q8BFT6 427 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Slx4Q6P1D7 1565 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 ItpripQ3TNL8 555 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 Frmd3Q8BHD4 595 aa19.4■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 EvcP57680 1005 aa19.39■□□□□ 0.7
Ubfd1-201ENSMUST00000033158 PaskQ8CEE6 1383 aa19.39■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 CenphQ9QYM8 241 aa19.39■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Hoxb7P09024 217 aa19.39■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Erich4Q3UNU4 136 aa19.39■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Tmem87bQ8BKU8 555 aa19.39■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 InsrP15208 1372 aa19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Fancd2Q80V62 1450 aa19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Limch1Q3UH68 1057 aa19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Mcm3P25206 812 aaKnown RBP19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Pafah1b1P63005 410 aaKnown RBP19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Slc7a3P70423 618 aa19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Lrrfip1Q3UZ39 729 aaKnown RBP19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Il1rapl2Q9ERS6 686 aa19.38■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Myd88P22366 296 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Erlin2Q8BFZ9 340 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Lrrc45Q8CIM1 670 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Gapvd1Q6PAR5 1458 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Otud6bQ8K2H2 294 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Nup133Q8R0G9 1155 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Rapgef6Q5NCJ1 1609 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Terf2O35144 541 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Polr3dQ91WD1 398 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 3425401B19RikD3Z1D3 1412 aa19.37■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Map3k2Q61083 619 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Ppm1eQ80TL0 749 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Golim4Q8BXA1 655 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Ces1hD3Z298 562 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Gnat3Q3V3I2 354 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 TxlnbQ8VBT1 685 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Echdc1Q9D9V3 322 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 SfswapQ3USH5 945 aaKnown RBP19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 VeztQ3ZK22 780 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Sugp2Q8CH09 1067 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Tbc1d7Q9D0K0 293 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Stxbp4Q9WV89 557 aa19.36■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Rbm27Q5SFM8 1060 aaKnown RBP19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Ccdc172Q810N9 267 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Eif4g1Q6NZJ6 1600 aaKnown RBP19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Jakmip2D3YXK0 820 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Pde4dQ01063 747 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Rsph6aQ8CDR2 708 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Acsbg1Q99PU5 721 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Rcan3Q9JKK0 239 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Ankle2Q6P1H6 964 aa19.35■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 NcapgE9PWG6 1004 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Mapkbp1Q6NS57 1503 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Map9Q3TRR0 646 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Ift57Q8BXG3 429 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Znf287Q9EQB9 759 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Stx6Q9JKK1 255 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Zbtb22Q9Z0G7 638 aa19.34■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Bag4Q8CI61 457 aa19.33■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Farp2Q91VS8 1065 aa19.33■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Klc3Q91W40 508 aa19.33■□□□□ 0.69
Ubfd1-201ENSMUST00000033158 Ccdc150Q8CDI7 1110 aa19.33■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Atf7Q8R0S1 413 aa19.33■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Mctp2Q5RJH2 878 aa19.33■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Ccdc66Q6NS45 935 aa19.33■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Cyb5rlB1AS42 316 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Zranb1Q7M760 708 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Rnf41Q8BH75 317 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Tshz3Q8CGV9 1081 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Secisbp2lQ6A098 1086 aaKnown RBP19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Rai14Q9EP71 979 aaKnown RBP19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Thoc2B1AZI6 1594 aaKnown RBP19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Rasa1E9PYG6 1038 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Duxf3A0A0N4SV92 674 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Wdhd1P59328 1117 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Cct2P80314 535 aaKnown RBP19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Tbc1d32Q3URV1 1296 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Vps37dQ810I0 261 aa19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Zmym4A2A791 1549 aaKnown RBP19.32■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Zap70P43404 618 aa19.31■□□□□ 0.68
Ubfd1-201ENSMUST00000033158 Ccdc178Q8CDV0 866 aa19.31■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms