Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 KRT8P32-201ENST00000512863 1461 ntBASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHAC2Q9Y5I4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 LINC00167-201ENST00000530583 1419 ntBASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 KRT18P31-201ENST00000506277 1292 ntBASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 AC006333.2-201ENST00000607957 2099 ntBASIC22.33■■□□□ 1.17
PCDHAC2Q9Y5I4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHAC2Q9Y5I4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHAC2Q9Y5I4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHAC2Q9Y5I4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHAC2Q9Y5I4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHAC2Q9Y5I4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 LINC01521-201ENST00000504184 1943 ntBASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 AP003733.1-201ENST00000491725 852 ntBASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 AC091304.2-201ENST00000564639 760 ntBASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 AC138894.3-201ENST00000603787 634 ntBASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHAC2Q9Y5I4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 AC091607.1-201ENST00000490318 1060 ntBASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 AC012615.1-201ENST00000565797 1299 ntBASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 FEM1AP3-201ENST00000403722 1741 ntBASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHAC2Q9Y5I4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDHAC2Q9Y5I4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHAC2Q9Y5I4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms