Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 KRT18P13-201ENST00000400056 1290 ntBASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 ABR-217ENST00000572441 563 ntTSL 4 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RTCBQ9Y3I0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 AC034236.2-201ENST00000606662 1610 ntBASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 AC007375.3-201ENST00000600936 2314 ntBASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RTCBQ9Y3I0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 AC006333.2-201ENST00000607957 2099 ntBASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 AC091607.1-201ENST00000490318 1060 ntBASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 AL773604.1-201ENST00000617417 272 ntBASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTCBQ9Y3I0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.64■■□□□ 1.38
RTCBQ9Y3I0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
RTCBQ9Y3I0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC23.64■■□□□ 1.38
RTCBQ9Y3I0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 TEX21P-204ENST00000641479 1693 ntBASIC23.64■■□□□ 1.37
RTCBQ9Y3I0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 KRT8P32-201ENST00000512863 1461 ntBASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 PKD1P6-201ENST00000343738 4769 ntBASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 FAM197Y8-203ENST00000450145 560 ntBASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 MINOS1P3-201ENST00000457048 203 ntBASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 AL353692.3-201ENST00000407031 1396 ntBASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.63■■□□□ 1.37
RTCBQ9Y3I0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms