Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 MFAP1P1-201ENST00000442257 1255 ntBASIC20.54■□□□□ 0.88
L1RE1Q9UN81 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
L1RE1Q9UN81 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 NAPSB-206ENST00000562112 1266 ntBASIC20.53■□□□□ 0.88
L1RE1Q9UN81 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 AC006333.2-201ENST00000607957 2099 ntBASIC20.53■□□□□ 0.88
L1RE1Q9UN81 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
L1RE1Q9UN81 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 NOC2LP1-202ENST00000452600 2235 ntBASIC20.52■□□□□ 0.88
L1RE1Q9UN81 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.52■□□□□ 0.88
L1RE1Q9UN81 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
L1RE1Q9UN81 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 KRT8P11-201ENST00000409686 1436 ntBASIC20.52■□□□□ 0.87
L1RE1Q9UN81 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
L1RE1Q9UN81 AC090164.3-201ENST00000610780 2143 ntBASIC20.51■□□□□ 0.87
L1RE1Q9UN81 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 AC145285.6-201ENST00000604632 637 ntBASIC20.51■□□□□ 0.87
L1RE1Q9UN81 BICD1-207ENST00000551848 1962 ntBASIC20.51■□□□□ 0.87
L1RE1Q9UN81 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.51■□□□□ 0.87
L1RE1Q9UN81 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
L1RE1Q9UN81 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms