Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDC42EP3Q9UKI2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 FAAHP1-202ENST00000446499 1238 ntBASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 RN7SL510P-201ENST00000581311 263 ntBASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CDC42EP3Q9UKI2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 AC092329.2-201ENST00000598402 547 ntBASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CDC42EP3Q9UKI2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDC42EP3Q9UKI2 AC246785.2-201ENST00000432512 513 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms