Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
HPS4Q9NQG7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 AC012313.10-201ENST00000623509 926 ntBASIC19.41■□□□□ 0.7
HPS4Q9NQG7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS4Q9NQG7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 AL645929.1-201ENST00000420084 975 ntBASIC19.4■□□□□ 0.7
HPS4Q9NQG7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 AC034232.1-201ENST00000506026 1064 ntBASIC19.4■□□□□ 0.7
HPS4Q9NQG7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 NPAP1P7-201ENST00000613027 823 ntBASIC19.4■□□□□ 0.7
HPS4Q9NQG7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS4Q9NQG7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.39■□□□□ 0.7
HPS4Q9NQG7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 MCCD1P1-208ENST00000445732 328 ntBASIC19.39■□□□□ 0.69
HPS4Q9NQG7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 MIR3180-5-201ENST00000583743 153 ntBASIC19.39■□□□□ 0.69
HPS4Q9NQG7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 KRT8P3-201ENST00000519669 1449 ntBASIC19.39■□□□□ 0.69
HPS4Q9NQG7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.39■□□□□ 0.69
HPS4Q9NQG7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.38■□□□□ 0.69
HPS4Q9NQG7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms