Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 AC139887.3-201ENST00000568585 713 ntBASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 AC011840.4-201ENST00000578471 627 ntBASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 AC008608.2-201ENST00000606089 416 ntBASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 AC008556.1-201ENST00000610908 2040 ntBASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.05■■□□□ 1.12
ZNF408Q9H9D4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 RPS8P6-201ENST00000426177 609 ntBASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ZNF408Q9H9D4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 RCC2P3-201ENST00000418112 1537 ntBASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.03■■□□□ 1.12
ZNF408Q9H9D4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 AC022898.2-201ENST00000616822 1312 ntBASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZNF408Q9H9D4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ZNF408Q9H9D4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 PMS2P2-201ENST00000425039 1128 ntBASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 AC096582.2-201ENST00000510860 516 ntBASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 AC027796.2-201ENST00000575326 344 ntBASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 MIR5100-201ENST00000579544 119 ntBASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZNF408Q9H9D4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
ZNF408Q9H9D4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF408Q9H9D4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF408Q9H9D4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF408Q9H9D4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22■■□□□ 1.11
ZNF408Q9H9D4 KRT8P7-201ENST00000533003 1432 ntBASIC22■■□□□ 1.11
ZNF408Q9H9D4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZNF408Q9H9D4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZNF408Q9H9D4 POM121L3P-201ENST00000419331 1163 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms