Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33BQ9H267 NUS1P2-201ENST00000417358 873 ntBASIC22.57■■□□□ 1.2
VPS33BQ9H267 KRT18P67-201ENST00000432816 1264 ntBASIC22.57■■□□□ 1.2
VPS33BQ9H267 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS33BQ9H267 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.57■■□□□ 1.2
VPS33BQ9H267 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS33BQ9H267 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS33BQ9H267 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS33BQ9H267 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33BQ9H267 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33BQ9H267 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33BQ9H267 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33BQ9H267 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VPS33BQ9H267 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC22.57■■□□□ 1.2
VPS33BQ9H267 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.56■■□□□ 1.2
VPS33BQ9H267 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.56■■□□□ 1.2
VPS33BQ9H267 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.56■■□□□ 1.2
VPS33BQ9H267 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.56■■□□□ 1.2
VPS33BQ9H267 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
VPS33BQ9H267 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
VPS33BQ9H267 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
VPS33BQ9H267 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VPS33BQ9H267 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 AL031284.1-201ENST00000419297 478 ntBASIC22.55■■□□□ 1.2
VPS33BQ9H267 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 AC091607.1-201ENST00000490318 1060 ntBASIC22.55■■□□□ 1.2
VPS33BQ9H267 RNPS1P1-201ENST00000507437 918 ntBASIC22.55■■□□□ 1.2
VPS33BQ9H267 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 KRT18P58-201ENST00000527480 1120 ntBASIC22.55■■□□□ 1.2
VPS33BQ9H267 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 MIR5100-201ENST00000579544 119 ntBASIC22.55■■□□□ 1.2
VPS33BQ9H267 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 AL591684.3-201ENST00000605187 298 ntBASIC22.55■■□□□ 1.2
VPS33BQ9H267 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.55■■□□□ 1.2
VPS33BQ9H267 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VPS33BQ9H267 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 AF186996.4-201ENST00000467186 377 ntBASIC22.54■■□□□ 1.2
VPS33BQ9H267 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
VPS33BQ9H267 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.54■■□□□ 1.2
VPS33BQ9H267 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 AC093909.1-201ENST00000504731 1122 ntBASIC22.53■■□□□ 1.2
VPS33BQ9H267 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 AC106730.1-201ENST00000566722 1090 ntBASIC22.53■■□□□ 1.2
VPS33BQ9H267 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
VPS33BQ9H267 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.53■■□□□ 1.2
VPS33BQ9H267 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.52■■□□□ 1.2
VPS33BQ9H267 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms