Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 AC104390.1-201ENST00000555663 520 ntBASIC19■□□□□ 0.63
COL25A1Q9BXS0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL25A1Q9BXS0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL25A1Q9BXS0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 FAM86GP-201ENST00000448322 971 ntBASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 AC092902.6-201ENST00000641783 218 ntBASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
COL25A1Q9BXS0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 TSPY16P-201ENST00000449843 468 ntBASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 MTDHP4-201ENST00000600287 670 ntBASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL25A1Q9BXS0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 AC108751.1-201ENST00000490852 363 ntBASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
COL25A1Q9BXS0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 AC109322.1-201ENST00000524499 1264 ntBASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 AP000867.4-201ENST00000641616 219 ntBASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.96■□□□□ 0.63
COL25A1Q9BXS0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 ARSEP1-201ENST00000420443 635 ntBASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 ABCD1P5-201ENST00000445663 754 ntBASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 INTS4P1-201ENST00000438455 1935 ntBASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.95■□□□□ 0.62
COL25A1Q9BXS0 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms