Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AL591684.3-201ENST00000605187 298 ntBASIC21.51■■□□□ 1.03
PTPN18Q99952 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.51■■□□□ 1.03
PTPN18Q99952 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN18Q99952 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN18Q99952 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN18Q99952 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN18Q99952 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PTPN18Q99952 TREX1-205ENST00000625293 1783 ntBASIC21.51■■□□□ 1.03
PTPN18Q99952 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN18Q99952 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN18Q99952 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN18Q99952 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PTPN18Q99952 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 MIR940-201ENST00000401276 94 ntBASIC21.5■■□□□ 1.03
PTPN18Q99952 AC018712.1-201ENST00000455767 687 ntBASIC21.5■■□□□ 1.03
PTPN18Q99952 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PTPN18Q99952 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.5■■□□□ 1.03
PTPN18Q99952 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN18Q99952 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN18Q99952 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PTPN18Q99952 TERC-201ENST00000602385 541 ntBASIC21.5■■□□□ 1.03
PTPN18Q99952 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PTPN18Q99952 AC006333.2-201ENST00000607957 2099 ntBASIC21.5■■□□□ 1.03
PTPN18Q99952 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN18Q99952 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN18Q99952 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.5■■□□□ 1.03
PTPN18Q99952 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN18Q99952 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN18Q99952 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN18Q99952 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN18Q99952 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 FAM220CP-201ENST00000395253 831 ntBASIC21.49■■□□□ 1.03
PTPN18Q99952 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 BX842568.4-201ENST00000421222 227 ntBASIC21.49■■□□□ 1.03
PTPN18Q99952 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN18Q99952 AC011840.4-201ENST00000578471 627 ntBASIC21.49■■□□□ 1.03
PTPN18Q99952 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN18Q99952 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN18Q99952 MIR7706-201ENST00000613747 67 ntBASIC21.49■■□□□ 1.03
PTPN18Q99952 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN18Q99952 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PTPN18Q99952 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN18Q99952 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.48■■□□□ 1.03
PTPN18Q99952 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PTPN18Q99952 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN18Q99952 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN18Q99952 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.47■■□□□ 1.03
PTPN18Q99952 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.47■■□□□ 1.03
PTPN18Q99952 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC21.47■■□□□ 1.03
PTPN18Q99952 AC132008.2-207ENST00000454517 770 ntBASIC21.47■■□□□ 1.03
PTPN18Q99952 AC073648.2-201ENST00000510116 352 ntBASIC21.47■■□□□ 1.03
PTPN18Q99952 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.47■■□□□ 1.03
PTPN18Q99952 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.47■■□□□ 1.03
PTPN18Q99952 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC21.47■■□□□ 1.03
PTPN18Q99952 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN18Q99952 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN18Q99952 TCF3P1-201ENST00000423021 1937 ntBASIC21.47■■□□□ 1.03
PTPN18Q99952 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN18Q99952 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN18Q99952 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms