Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 PMS2P7-201ENST00000506558 1336 ntBASIC15.91■□□□□ 0.14
SPG11Q96JI7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPG11Q96JI7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.91■□□□□ 0.14
SPG11Q96JI7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 HTR5BP-201ENST00000430851 1154 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC009065.1-201ENST00000564055 1225 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 AP001005.1-201ENST00000571755 1248 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 AL390719.2-201ENST00000606993 987 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC027796.2-201ENST00000575326 344 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 MIR3180-5-201ENST00000583743 153 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC005332.3-201ENST00000589904 676 ntBASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPG11Q96JI7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.9■□□□□ 0.14
SPG11Q96JI7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 MCCD1P1-208ENST00000445732 328 ntBASIC15.89■□□□□ 0.13
SPG11Q96JI7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 NSUN5P1-202ENST00000421140 1535 ntBASIC15.89■□□□□ 0.13
SPG11Q96JI7 NSUN5P2-203ENST00000457352 1529 ntBASIC15.89■□□□□ 0.13
SPG11Q96JI7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 AC005104.2-201ENST00000427818 678 ntBASIC15.89■□□□□ 0.13
SPG11Q96JI7 RNPS1P1-201ENST00000507437 918 ntBASIC15.89■□□□□ 0.13
SPG11Q96JI7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 HOXB1-202ENST00000577092 1414 ntBASIC15.89■□□□□ 0.13
SPG11Q96JI7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPG11Q96JI7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.89■□□□□ 0.13
SPG11Q96JI7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.88■□□□□ 0.13
SPG11Q96JI7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPG11Q96JI7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms