Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC104417.2-201ENST00000562989 1793 ntBASIC19.21■□□□□ 0.67
SIX5Q8N196 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SIX5Q8N196 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIX5Q8N196 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SIX5Q8N196 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.2■□□□□ 0.66
SIX5Q8N196 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.2■□□□□ 0.66
SIX5Q8N196 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
SIX5Q8N196 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 MIR574-201ENST00000385209 96 ntBASIC19.2■□□□□ 0.66
SIX5Q8N196 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.2■□□□□ 0.66
SIX5Q8N196 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.2■□□□□ 0.66
SIX5Q8N196 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.2■□□□□ 0.66
SIX5Q8N196 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.2■□□□□ 0.66
SIX5Q8N196 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SIX5Q8N196 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIX5Q8N196 AC233702.3-201ENST00000578656 1387 ntBASIC19.19■□□□□ 0.66
SIX5Q8N196 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.19■□□□□ 0.66
SIX5Q8N196 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 AL691432.2-201ENST00000607222 2038 ntBASIC19.19■□□□□ 0.66
SIX5Q8N196 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIX5Q8N196 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.19■□□□□ 0.66
SIX5Q8N196 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SIX5Q8N196 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.19■□□□□ 0.66
SIX5Q8N196 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.19■□□□□ 0.66
SIX5Q8N196 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SIX5Q8N196 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.19■□□□□ 0.66
SIX5Q8N196 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.19■□□□□ 0.66
SIX5Q8N196 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIX5Q8N196 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
SIX5Q8N196 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
SIX5Q8N196 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SIX5Q8N196 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.19■□□□□ 0.66
SIX5Q8N196 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIX5Q8N196 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.18■□□□□ 0.66
SIX5Q8N196 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SIX5Q8N196 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX5Q8N196 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.18■□□□□ 0.66
SIX5Q8N196 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIX5Q8N196 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIX5Q8N196 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX5Q8N196 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.18■□□□□ 0.66
SIX5Q8N196 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.18■□□□□ 0.66
SIX5Q8N196 AC005332.3-201ENST00000589904 676 ntBASIC19.18■□□□□ 0.66
SIX5Q8N196 Z69720.1-201ENST00000601483 472 ntBASIC19.18■□□□□ 0.66
SIX5Q8N196 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.18■□□□□ 0.66
SIX5Q8N196 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIX5Q8N196 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIX5Q8N196 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.18■□□□□ 0.66
SIX5Q8N196 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX5Q8N196 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX5Q8N196 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIX5Q8N196 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.18■□□□□ 0.66
SIX5Q8N196 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SIX5Q8N196 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.17■□□□□ 0.66
SIX5Q8N196 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.17■□□□□ 0.66
SIX5Q8N196 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 AKR1C7P-201ENST00000305623 895 ntBASIC19.17■□□□□ 0.66
SIX5Q8N196 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 SAPCD2P3-201ENST00000455031 850 ntBASIC19.17■□□□□ 0.66
SIX5Q8N196 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.17■□□□□ 0.66
SIX5Q8N196 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
SIX5Q8N196 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.17■□□□□ 0.66
SIX5Q8N196 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.17■□□□□ 0.66
SIX5Q8N196 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.17■□□□□ 0.66
SIX5Q8N196 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SIX5Q8N196 AC064862.7-201ENST00000604520 867 ntBASIC19.17■□□□□ 0.66
SIX5Q8N196 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 IL9RP2-201ENST00000423948 1312 ntBASIC19.17■□□□□ 0.66
SIX5Q8N196 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.17■□□□□ 0.66
SIX5Q8N196 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms