Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC131212.1-201ENST00000613771 668 ntBASIC16.52■□□□□ 0.24
LYSMD2Q8IV50 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
LYSMD2Q8IV50 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LYSMD2Q8IV50 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.52■□□□□ 0.24
LYSMD2Q8IV50 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LYSMD2Q8IV50 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 TERF1P2-201ENST00000583350 1212 ntBASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LYSMD2Q8IV50 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 AC004854.2-201ENST00000608450 1441 ntBASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LYSMD2Q8IV50 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 AL591742.1-201ENST00000604433 565 ntBASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.49■□□□□ 0.23
LYSMD2Q8IV50 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms