Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 UBE2SP1-201ENST00000450587 669 ntBASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 AC116562.2-201ENST00000507042 360 ntBASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CHD1LQ86WJ1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 AL354751.1-201ENST00000412768 1863 ntBASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 AC008622.2-201ENST00000617006 1229 ntBASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CHD1LQ86WJ1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 ABHD17AP1-201ENST00000358206 933 ntBASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 NUDT16P1-203ENST00000513809 620 ntBASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 AC113410.3-201ENST00000623366 203 ntBASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 AC096733.2-201ENST00000609937 1394 ntBASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 TBC1D3P2-202ENST00000577902 1649 ntBASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CHD1LQ86WJ1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
CHD1LQ86WJ1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 AC233702.5-201ENST00000584107 538 ntBASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHD1LQ86WJ1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHD1LQ86WJ1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms