Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RNF213Q63HN8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
RNF213Q63HN8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
RNF213Q63HN8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
RNF213Q63HN8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 KRT18P2-201ENST00000447938 1258 ntBASIC10□□□□□ -0.81
RNF213Q63HN8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10□□□□□ -0.81
RNF213Q63HN8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 AC004449.1-201ENST00000564240 433 ntBASIC10□□□□□ -0.81
RNF213Q63HN8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
RNF213Q63HN8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 MKNK2P1-201ENST00000437526 628 ntBASIC10□□□□□ -0.81
RNF213Q63HN8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10□□□□□ -0.81
RNF213Q63HN8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10□□□□□ -0.81
RNF213Q63HN8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
RNF213Q63HN8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10□□□□□ -0.81
RNF213Q63HN8 AC010240.3-201ENST00000607688 395 ntBASIC10□□□□□ -0.81
RNF213Q63HN8 SPTSSB-204ENST00000617024 1292 ntBASIC10□□□□□ -0.81
RNF213Q63HN8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10□□□□□ -0.81
RNF213Q63HN8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC10□□□□□ -0.81
RNF213Q63HN8 AL033527.4-201ENST00000641026 673 ntBASIC10□□□□□ -0.81
RNF213Q63HN8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 AL023284.2-201ENST00000405850 579 ntBASIC9.99□□□□□ -0.81
RNF213Q63HN8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 MTDHP3-201ENST00000594186 672 ntBASIC9.99□□□□□ -0.81
RNF213Q63HN8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 AC064836.3-201ENST00000607928 673 ntBASIC9.99□□□□□ -0.81
RNF213Q63HN8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
RNF213Q63HN8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC9.99□□□□□ -0.81
RNF213Q63HN8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RNF213Q63HN8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RNF213Q63HN8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 LINC00628-201ENST00000628516 1289 ntBASIC9.98□□□□□ -0.81
RNF213Q63HN8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RNF213Q63HN8 AP005117.1-201ENST00000584346 1413 ntBASIC9.98□□□□□ -0.81
RNF213Q63HN8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
RNF213Q63HN8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms